Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox6P40645 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Sox6P40645 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sox6P40645 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox6P40645 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.22■□□□□ 0.03
Sox6P40645 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox6P40645 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox6P40645 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox6P40645 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox6P40645 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox6P40645 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox6P40645 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.21■□□□□ 0.03
Sox6P40645 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Sox6P40645 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.21■□□□□ 0.03
Sox6P40645 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sox6P40645 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox6P40645 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Sox6P40645 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox6P40645 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sox6P40645 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Sox6P40645 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sox6P40645 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Sox6P40645 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sox6P40645 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sox6P40645 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.2■□□□□ 0.02
Sox6P40645 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Sox6P40645 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox6P40645 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox6P40645 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox6P40645 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox6P40645 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox6P40645 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sox6P40645 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox6P40645 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.2■□□□□ 0.02
Sox6P40645 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox6P40645 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Sox6P40645 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox6P40645 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Sox6P40645 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox6P40645 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox6P40645 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Sox6P40645 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox6P40645 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox6P40645 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox6P40645 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox6P40645 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox6P40645 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox6P40645 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox6P40645 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sox6P40645 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sox6P40645 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.2■□□□□ 0.02
Sox6P40645 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
Sox6P40645 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.19■□□□□ 0.02
Sox6P40645 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Sox6P40645 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.19■□□□□ 0.02
Sox6P40645 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Sox6P40645 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.19■□□□□ 0.02
Sox6P40645 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.19■□□□□ 0.02
Sox6P40645 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Sox6P40645 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.19■□□□□ 0.02
Sox6P40645 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.19■□□□□ 0.02
Sox6P40645 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.19■□□□□ 0.02
Sox6P40645 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Sox6P40645 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.19■□□□□ 0.02
Sox6P40645 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sox6P40645 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox6P40645 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox6P40645 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox6P40645 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox6P40645 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox6P40645 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox6P40645 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox6P40645 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox6P40645 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox6P40645 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox6P40645 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sox6P40645 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sox6P40645 Gm6433-201ENSMUST00000118634 875 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms