Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp13P33435 Gm7213-201ENSMUST00000215977 950 ntBASIC16.58■□□□□ 0.24
Mmp13P33435 Gm18032-201ENSMUST00000222541 538 ntBASIC16.58■□□□□ 0.24
Mmp13P33435 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp13P33435 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.58■□□□□ 0.24
Mmp13P33435 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
Mmp13P33435 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp13P33435 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp13P33435 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp13P33435 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp13P33435 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp13P33435 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp13P33435 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp13P33435 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp13P33435 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Mmp13P33435 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp13P33435 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp13P33435 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp13P33435 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.57■□□□□ 0.24
Mmp13P33435 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp13P33435 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.57■□□□□ 0.24
Mmp13P33435 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp13P33435 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.57■□□□□ 0.24
Mmp13P33435 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.57■□□□□ 0.24
Mmp13P33435 Gm27389-201ENSMUST00000183622 195 ntBASIC16.57■□□□□ 0.24
Mmp13P33435 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.57■□□□□ 0.24
Mmp13P33435 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp13P33435 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp13P33435 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp13P33435 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp13P33435 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Mmp13P33435 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp13P33435 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp13P33435 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp13P33435 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp13P33435 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp13P33435 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp13P33435 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Mmp13P33435 Actl10-202ENSMUST00000226583 1501 ntBASIC16.56■□□□□ 0.24
Mmp13P33435 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp13P33435 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp13P33435 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Mmp13P33435 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp13P33435 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Mmp13P33435 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp13P33435 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Mmp13P33435 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp13P33435 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Mmp13P33435 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp13P33435 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Mmp13P33435 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp13P33435 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp13P33435 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp13P33435 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp13P33435 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp13P33435 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp13P33435 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp13P33435 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp13P33435 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Mmp13P33435 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp13P33435 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp13P33435 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Mmp13P33435 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp13P33435 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp13P33435 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.55■□□□□ 0.24
Mmp13P33435 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp13P33435 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp13P33435 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.55■□□□□ 0.24
Mmp13P33435 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp13P33435 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp13P33435 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp13P33435 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Mmp13P33435 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp13P33435 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp13P33435 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Mmp13P33435 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp13P33435 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp13P33435 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp13P33435 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Mmp13P33435 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp13P33435 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Mmp13P33435 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Mmp13P33435 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp13P33435 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Mmp13P33435 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Mmp13P33435 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mmp13P33435 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Mmp13P33435 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Mmp13P33435 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Mmp13P33435 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mmp13P33435 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mmp13P33435 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.54■□□□□ 0.24
Mmp13P33435 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Mmp13P33435 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.54■□□□□ 0.24
Mmp13P33435 Gm6659-201ENSMUST00000174752 547 ntBASIC16.54■□□□□ 0.24
Mmp13P33435 Mir1668-201ENSMUST00000184114 107 ntBASIC16.54■□□□□ 0.24
Mmp13P33435 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mmp13P33435 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Mmp13P33435 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Mmp13P33435 Prob1-201ENSMUST00000097619 3021 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms