Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1P28660 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1P28660 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.06■□□□□ 0.16
Nckap1P28660 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1P28660 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1P28660 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1P28660 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1P28660 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1P28660 Gm7506-201ENSMUST00000207758 815 ntBASIC16.06■□□□□ 0.16
Nckap1P28660 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1P28660 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Nckap1P28660 Gm10060-201ENSMUST00000212002 111 ntBASIC16.06■□□□□ 0.16
Nckap1P28660 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.06■□□□□ 0.16
Nckap1P28660 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.06■□□□□ 0.16
Nckap1P28660 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1P28660 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1P28660 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1P28660 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1P28660 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1P28660 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1P28660 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.06■□□□□ 0.16
Nckap1P28660 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1P28660 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1P28660 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nckap1P28660 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Nckap1P28660 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nckap1P28660 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nckap1P28660 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.05■□□□□ 0.16
Nckap1P28660 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nckap1P28660 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Nckap1P28660 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.05■□□□□ 0.16
Nckap1P28660 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nckap1P28660 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nckap1P28660 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nckap1P28660 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nckap1P28660 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.05■□□□□ 0.16
Nckap1P28660 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.05■□□□□ 0.16
Nckap1P28660 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nckap1P28660 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nckap1P28660 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nckap1P28660 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nckap1P28660 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Nckap1P28660 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nckap1P28660 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nckap1P28660 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
Nckap1P28660 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nckap1P28660 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
Nckap1P28660 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nckap1P28660 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nckap1P28660 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Nckap1P28660 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nckap1P28660 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nckap1P28660 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nckap1P28660 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nckap1P28660 Mir5131-201ENSMUST00000175426 93 ntBASIC16.04■□□□□ 0.16
Nckap1P28660 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nckap1P28660 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.04■□□□□ 0.16
Nckap1P28660 AW822252-206ENSMUST00000208904 237 ntBASIC16.04■□□□□ 0.16
Nckap1P28660 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.04■□□□□ 0.16
Nckap1P28660 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.04■□□□□ 0.16
Nckap1P28660 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nckap1P28660 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nckap1P28660 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nckap1P28660 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
Nckap1P28660 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nckap1P28660 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.04■□□□□ 0.16
Nckap1P28660 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nckap1P28660 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nckap1P28660 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nckap1P28660 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nckap1P28660 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.04■□□□□ 0.16
Nckap1P28660 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nckap1P28660 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.03■□□□□ 0.16
Nckap1P28660 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Nckap1P28660 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nckap1P28660 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.03■□□□□ 0.16
Nckap1P28660 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nckap1P28660 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nckap1P28660 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Nckap1P28660 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.03■□□□□ 0.16
Nckap1P28660 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.03■□□□□ 0.16
Nckap1P28660 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.03■□□□□ 0.16
Nckap1P28660 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nckap1P28660 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nckap1P28660 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Nckap1P28660 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nckap1P28660 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nckap1P28660 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nckap1P28660 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nckap1P28660 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Nckap1P28660 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nckap1P28660 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nckap1P28660 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nckap1P28660 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nckap1P28660 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.02■□□□□ 0.16
Nckap1P28660 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Nckap1P28660 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nckap1P28660 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nckap1P28660 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nckap1P28660 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms