Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm44466-201ENSMUST00000200264 138 ntBASIC13.49□□□□□ -0.25
Col8a2P25318 Gm44359-201ENSMUST00000200671 138 ntBASIC13.49□□□□□ -0.25
Col8a2P25318 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Col8a2P25318 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Col8a2P25318 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col8a2P25318 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col8a2P25318 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col8a2P25318 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col8a2P25318 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col8a2P25318 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col8a2P25318 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Col8a2P25318 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col8a2P25318 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col8a2P25318 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col8a2P25318 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col8a2P25318 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Col8a2P25318 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col8a2P25318 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
Col8a2P25318 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col8a2P25318 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col8a2P25318 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.48□□□□□ -0.25
Col8a2P25318 Gm25745-201ENSMUST00000174945 133 ntBASIC13.48□□□□□ -0.25
Col8a2P25318 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.48□□□□□ -0.25
Col8a2P25318 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Col8a2P25318 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col8a2P25318 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.48□□□□□ -0.25
Col8a2P25318 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col8a2P25318 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col8a2P25318 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Col8a2P25318 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col8a2P25318 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Col8a2P25318 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col8a2P25318 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col8a2P25318 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Col8a2P25318 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col8a2P25318 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Col8a2P25318 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Col8a2P25318 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Col8a2P25318 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col8a2P25318 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Col8a2P25318 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col8a2P25318 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col8a2P25318 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col8a2P25318 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.47□□□□□ -0.25
Col8a2P25318 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col8a2P25318 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col8a2P25318 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col8a2P25318 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col8a2P25318 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col8a2P25318 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Col8a2P25318 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col8a2P25318 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col8a2P25318 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.47□□□□□ -0.25
Col8a2P25318 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col8a2P25318 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.47□□□□□ -0.25
Col8a2P25318 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Col8a2P25318 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.47□□□□□ -0.25
Col8a2P25318 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col8a2P25318 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.47□□□□□ -0.25
Col8a2P25318 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col8a2P25318 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col8a2P25318 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col8a2P25318 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col8a2P25318 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Col8a2P25318 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Col8a2P25318 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Col8a2P25318 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.47□□□□□ -0.25
Col8a2P25318 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Col8a2P25318 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Col8a2P25318 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col8a2P25318 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col8a2P25318 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col8a2P25318 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col8a2P25318 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Col8a2P25318 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col8a2P25318 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col8a2P25318 Gm13884-201ENSMUST00000118103 829 ntBASIC13.46□□□□□ -0.25
Col8a2P25318 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.46□□□□□ -0.25
Col8a2P25318 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.46□□□□□ -0.25
Col8a2P25318 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col8a2P25318 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Col8a2P25318 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.46□□□□□ -0.25
Col8a2P25318 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col8a2P25318 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.46□□□□□ -0.25
Col8a2P25318 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col8a2P25318 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col8a2P25318 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.26
Col8a2P25318 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col8a2P25318 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col8a2P25318 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms