Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Tnfrsf1bP25119 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tnfrsf1bP25119 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tnfrsf1bP25119 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Tnfrsf1bP25119 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Tnfrsf1bP25119 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tnfrsf1bP25119 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Gm27357-201ENSMUST00000183754 135 ntBASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tnfrsf1bP25119 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Tnfrsf1bP25119 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.96□□□□□ -0.02
Tnfrsf1bP25119 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Tnfrsf1bP25119 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.96□□□□□ -0.02
Tnfrsf1bP25119 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Tnfrsf1bP25119 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Tnfrsf1bP25119 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.02
Tnfrsf1bP25119 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1bP25119 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Gm13312-201ENSMUST00000119631 718 ntBASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.94□□□□□ -0.02
Tnfrsf1bP25119 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfrsf1bP25119 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Tnfrsf1bP25119 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Tnfrsf1bP25119 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfrsf1bP25119 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfrsf1bP25119 Gm9103-201ENSMUST00000119371 405 ntBASIC14.93□□□□□ -0.02
Tnfrsf1bP25119 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfrsf1bP25119 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms