Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxc9P09633 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxc9P09633 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC20.9■□□□□ 0.94
Hoxc9P09633 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxc9P09633 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC20.9■□□□□ 0.94
Hoxc9P09633 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxc9P09633 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxc9P09633 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Hoxc9P09633 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Hoxc9P09633 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Hoxc9P09633 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxc9P09633 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Hoxc9P09633 Ndufaf2-202ENSMUST00000223734 556 ntBASIC20.9■□□□□ 0.94
Hoxc9P09633 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxc9P09633 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxc9P09633 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxc9P09633 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hoxc9P09633 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Hoxc9P09633 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Hoxc9P09633 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Hoxc9P09633 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hoxc9P09633 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxc9P09633 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxc9P09633 Gm15358-201ENSMUST00000119249 520 ntBASIC20.89■□□□□ 0.93
Hoxc9P09633 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC20.89■□□□□ 0.93
Hoxc9P09633 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxc9P09633 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxc9P09633 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxc9P09633 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Hoxc9P09633 Gm5648-201ENSMUST00000122244 1587 ntBASIC20.89■□□□□ 0.93
Hoxc9P09633 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxc9P09633 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxc9P09633 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC20.88■□□□□ 0.93
Hoxc9P09633 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxc9P09633 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxc9P09633 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxc9P09633 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxc9P09633 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxc9P09633 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Hoxc9P09633 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC20.88■□□□□ 0.93
Hoxc9P09633 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC20.88■□□□□ 0.93
Hoxc9P09633 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC20.88■□□□□ 0.93
Hoxc9P09633 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC20.88■□□□□ 0.93
Hoxc9P09633 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxc9P09633 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxc9P09633 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Hoxc9P09633 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxc9P09633 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxc9P09633 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxc9P09633 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC20.88■□□□□ 0.93
Hoxc9P09633 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxc9P09633 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxc9P09633 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Hoxc9P09633 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxc9P09633 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxc9P09633 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Hoxc9P09633 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxc9P09633 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC20.87■□□□□ 0.93
Hoxc9P09633 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxc9P09633 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC20.87■□□□□ 0.93
Hoxc9P09633 AC151286.1-201ENSMUST00000198489 145 ntBASIC20.87■□□□□ 0.93
Hoxc9P09633 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxc9P09633 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxc9P09633 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.87■□□□□ 0.93
Hoxc9P09633 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxc9P09633 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxc9P09633 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxc9P09633 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxc9P09633 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxc9P09633 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxc9P09633 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxc9P09633 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.87■□□□□ 0.93
Hoxc9P09633 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.87■□□□□ 0.93
Hoxc9P09633 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Hoxc9P09633 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxc9P09633 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxc9P09633 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxc9P09633 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxc9P09633 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxc9P09633 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC20.86■□□□□ 0.93
Hoxc9P09633 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxc9P09633 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxc9P09633 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxc9P09633 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Hoxc9P09633 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxc9P09633 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxc9P09633 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Hoxc9P09633 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxc9P09633 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxc9P09633 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxc9P09633 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Hoxc9P09633 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC20.85■□□□□ 0.93
Hoxc9P09633 Gm4913-201ENSMUST00000117075 1290 ntBASIC20.85■□□□□ 0.93
Hoxc9P09633 Gm11185-201ENSMUST00000117732 1007 ntBASIC20.85■□□□□ 0.93
Hoxc9P09633 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC20.85■□□□□ 0.93
Hoxc9P09633 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Hoxc9P09633 Gm5253-201ENSMUST00000187104 1025 ntBASIC20.85■□□□□ 0.93
Hoxc9P09633 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Hoxc9P09633 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxc9P09633 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms