Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
P06328 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
P06328 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
P06328 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
P06328 Gm16061-201ENSMUST00000122167 857 ntBASIC11.85□□□□□ -0.51
P06328 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Gm13474-201ENSMUST00000122466 815 ntBASIC11.85□□□□□ -0.51
P06328 Gm2274-201ENSMUST00000184539 609 ntBASIC11.85□□□□□ -0.51
P06328 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC11.85□□□□□ -0.51
P06328 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC11.85□□□□□ -0.51
P06328 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.85□□□□□ -0.51
P06328 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
P06328 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
P06328 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P06328 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
P06328 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.84□□□□□ -0.51
P06328 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.84□□□□□ -0.51
P06328 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
P06328 Gm36967-201ENSMUST00000193814 266 ntBASIC11.84□□□□□ -0.51
P06328 Gm30025-201ENSMUST00000218555 728 ntBASIC11.84□□□□□ -0.51
P06328 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
P06328 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.84□□□□□ -0.51
P06328 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
P06328 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
P06328 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.84□□□□□ -0.51
P06328 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
P06328 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
P06328 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06328 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
P06328 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
P06328 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
P06328 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
P06328 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
P06328 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
P06328 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06328 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms