Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
TcraP01849 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC11.86□□□□□ -0.51
TcraP01849 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
TcraP01849 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TcraP01849 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TcraP01849 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
TcraP01849 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
TcraP01849 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
TcraP01849 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
TcraP01849 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TcraP01849 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TcraP01849 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
TcraP01849 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
TcraP01849 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC11.85□□□□□ -0.51
TcraP01849 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
TcraP01849 Gm3807-201ENSMUST00000193520 1168 ntBASIC11.85□□□□□ -0.51
TcraP01849 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC11.85□□□□□ -0.51
TcraP01849 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC11.85□□□□□ -0.51
TcraP01849 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TcraP01849 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TcraP01849 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
TcraP01849 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TcraP01849 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TcraP01849 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.85□□□□□ -0.51
TcraP01849 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
TcraP01849 Gm44616-201ENSMUST00000206417 1732 ntBASIC11.85□□□□□ -0.51
TcraP01849 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TcraP01849 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TcraP01849 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TcraP01849 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
TcraP01849 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
TcraP01849 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TcraP01849 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
TcraP01849 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
TcraP01849 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
TcraP01849 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Gm13148-201ENSMUST00000118892 745 ntBASIC11.84□□□□□ -0.51
TcraP01849 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC11.84□□□□□ -0.51
TcraP01849 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC11.84□□□□□ -0.51
TcraP01849 Gm37179-201ENSMUST00000194862 823 ntBASIC11.84□□□□□ -0.51
TcraP01849 Gm44672-201ENSMUST00000206944 1098 ntBASIC11.84□□□□□ -0.51
TcraP01849 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC11.84□□□□□ -0.51
TcraP01849 Wnt10b-205ENSMUST00000226846 1204 ntBASIC11.84□□□□□ -0.51
TcraP01849 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Gm10602-201ENSMUST00000098239 609 ntBASIC11.84□□□□□ -0.51
TcraP01849 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TcraP01849 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
TcraP01849 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
TcraP01849 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
TcraP01849 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.83□□□□□ -0.51
TcraP01849 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
TcraP01849 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
TcraP01849 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TcraP01849 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TcraP01849 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TcraP01849 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TcraP01849 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TcraP01849 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TcraP01849 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TcraP01849 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.83□□□□□ -0.52
TcraP01849 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TcraP01849 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
TcraP01849 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
TcraP01849 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC11.83□□□□□ -0.52
TcraP01849 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC11.83□□□□□ -0.52
TcraP01849 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TcraP01849 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TcraP01849 Zfp783-201ENSMUST00000095946 670 ntBASIC11.83□□□□□ -0.52
TcraP01849 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TcraP01849 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC11.83□□□□□ -0.52
TcraP01849 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TcraP01849 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TcraP01849 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
TcraP01849 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TcraP01849 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
TcraP01849 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TcraP01849 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
TcraP01849 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms