Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Best1O88870 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.5■□□□□ 0.07
Best1O88870 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Best1O88870 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Best1O88870 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Best1O88870 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Best1O88870 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Best1O88870 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Best1O88870 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.5■□□□□ 0.07
Best1O88870 Gm13418-201ENSMUST00000119097 944 ntBASIC15.5■□□□□ 0.07
Best1O88870 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Best1O88870 Gm11780-201ENSMUST00000136880 516 ntBASIC15.5■□□□□ 0.07
Best1O88870 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Best1O88870 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Best1O88870 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Best1O88870 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Best1O88870 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Best1O88870 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Best1O88870 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Best1O88870 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Best1O88870 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Best1O88870 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Best1O88870 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Best1O88870 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Best1O88870 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Best1O88870 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Best1O88870 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Best1O88870 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Best1O88870 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Best1O88870 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Best1O88870 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Best1O88870 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.49■□□□□ 0.07
Best1O88870 Gm7230-201ENSMUST00000173026 815 ntBASIC15.49■□□□□ 0.07
Best1O88870 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.49■□□□□ 0.07
Best1O88870 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.49■□□□□ 0.07
Best1O88870 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.49■□□□□ 0.07
Best1O88870 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Best1O88870 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.49■□□□□ 0.07
Best1O88870 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.49■□□□□ 0.07
Best1O88870 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Best1O88870 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Best1O88870 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Best1O88870 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Best1O88870 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Best1O88870 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Best1O88870 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Best1O88870 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Best1O88870 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Best1O88870 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Best1O88870 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Best1O88870 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Best1O88870 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Best1O88870 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Best1O88870 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Best1O88870 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Best1O88870 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Best1O88870 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Best1O88870 Gm6257-201ENSMUST00000163864 910 ntBASIC15.48■□□□□ 0.07
Best1O88870 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Best1O88870 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Best1O88870 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.48■□□□□ 0.07
Best1O88870 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.48■□□□□ 0.07
Best1O88870 Gm6089-201ENSMUST00000197666 938 ntBASIC15.48■□□□□ 0.07
Best1O88870 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Best1O88870 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.48■□□□□ 0.07
Best1O88870 Gm18622-201ENSMUST00000219361 595 ntBASIC15.48■□□□□ 0.07
Best1O88870 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Best1O88870 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Best1O88870 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.48■□□□□ 0.07
Best1O88870 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Best1O88870 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Best1O88870 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Best1O88870 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Best1O88870 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Best1O88870 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Best1O88870 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Best1O88870 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Best1O88870 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Best1O88870 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Best1O88870 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Best1O88870 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Best1O88870 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Best1O88870 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Best1O88870 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Best1O88870 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.47■□□□□ 0.07
Best1O88870 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Best1O88870 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.47■□□□□ 0.07
Best1O88870 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.47■□□□□ 0.07
Best1O88870 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.47■□□□□ 0.07
Best1O88870 Gm2651-201ENSMUST00000203560 838 ntBASIC15.47■□□□□ 0.07
Best1O88870 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.47■□□□□ 0.07
Best1O88870 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Best1O88870 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Best1O88870 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Best1O88870 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Best1O88870 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Best1O88870 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Best1O88870 Haglr-201ENSMUST00000100000 2085 ntBASIC15.47■□□□□ 0.07
Best1O88870 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Best1O88870 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms