Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Becn1O88597 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Becn1O88597 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Becn1O88597 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Becn1O88597 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Becn1O88597 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Becn1O88597 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Becn1O88597 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Becn1O88597 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Becn1O88597 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Becn1O88597 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Becn1O88597 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Becn1O88597 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Becn1O88597 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Becn1O88597 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Becn1O88597 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.55■□□□□ 0.56
Becn1O88597 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Becn1O88597 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Becn1O88597 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.55■□□□□ 0.56
Becn1O88597 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.55■□□□□ 0.56
Becn1O88597 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Becn1O88597 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Becn1O88597 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Becn1O88597 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Becn1O88597 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Becn1O88597 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Becn1O88597 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Becn1O88597 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Becn1O88597 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Becn1O88597 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Becn1O88597 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Becn1O88597 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Becn1O88597 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.54■□□□□ 0.56
Becn1O88597 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Becn1O88597 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Becn1O88597 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Becn1O88597 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC18.54■□□□□ 0.56
Becn1O88597 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.54■□□□□ 0.56
Becn1O88597 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Becn1O88597 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Becn1O88597 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Becn1O88597 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Becn1O88597 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Becn1O88597 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Becn1O88597 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Becn1O88597 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Becn1O88597 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Becn1O88597 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.53■□□□□ 0.56
Becn1O88597 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.53■□□□□ 0.56
Becn1O88597 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.53■□□□□ 0.56
Becn1O88597 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Becn1O88597 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Becn1O88597 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Becn1O88597 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Becn1O88597 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Becn1O88597 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Becn1O88597 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Becn1O88597 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Becn1O88597 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Becn1O88597 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC18.53■□□□□ 0.56
Becn1O88597 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Becn1O88597 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Becn1O88597 Gm43352-201ENSMUST00000196419 3065 ntBASIC18.52■□□□□ 0.56
Becn1O88597 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Becn1O88597 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Becn1O88597 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Becn1O88597 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.52■□□□□ 0.56
Becn1O88597 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Becn1O88597 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.52■□□□□ 0.56
Becn1O88597 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Becn1O88597 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Becn1O88597 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Becn1O88597 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Becn1O88597 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Becn1O88597 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Becn1O88597 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Becn1O88597 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Becn1O88597 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.52■□□□□ 0.55
Becn1O88597 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Becn1O88597 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Becn1O88597 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Becn1O88597 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Becn1O88597 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Becn1O88597 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.51■□□□□ 0.55
Becn1O88597 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Becn1O88597 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Becn1O88597 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Becn1O88597 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Becn1O88597 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Becn1O88597 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Becn1O88597 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Becn1O88597 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Becn1O88597 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Becn1O88597 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Becn1O88597 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Becn1O88597 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Becn1O88597 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.51■□□□□ 0.55
Becn1O88597 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Becn1O88597 Gm10138-203ENSMUST00000206952 366 ntBASIC18.51■□□□□ 0.55
Becn1O88597 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms