Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a20bO88575 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.58■□□□□ 0.4
Slc6a20bO88575 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a20bO88575 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Slc6a20bO88575 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a20bO88575 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a20bO88575 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.58■□□□□ 0.4
Slc6a20bO88575 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a20bO88575 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Slc6a20bO88575 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.58■□□□□ 0.4
Slc6a20bO88575 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Slc6a20bO88575 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a20bO88575 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a20bO88575 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a20bO88575 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a20bO88575 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a20bO88575 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.57■□□□□ 0.4
Slc6a20bO88575 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Slc6a20bO88575 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.57■□□□□ 0.4
Slc6a20bO88575 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a20bO88575 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a20bO88575 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a20bO88575 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a20bO88575 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Slc6a20bO88575 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a20bO88575 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a20bO88575 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a20bO88575 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc6a20bO88575 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20bO88575 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20bO88575 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.56■□□□□ 0.4
Slc6a20bO88575 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20bO88575 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20bO88575 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20bO88575 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.56■□□□□ 0.4
Slc6a20bO88575 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20bO88575 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20bO88575 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.56■□□□□ 0.4
Slc6a20bO88575 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20bO88575 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.56■□□□□ 0.4
Slc6a20bO88575 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.56■□□□□ 0.4
Slc6a20bO88575 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20bO88575 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Slc6a20bO88575 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20bO88575 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20bO88575 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20bO88575 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20bO88575 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20bO88575 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20bO88575 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Slc6a20bO88575 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20bO88575 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20bO88575 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc6a20bO88575 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20bO88575 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20bO88575 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Slc6a20bO88575 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20bO88575 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20bO88575 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20bO88575 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20bO88575 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Slc6a20bO88575 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20bO88575 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.55■□□□□ 0.4
Slc6a20bO88575 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20bO88575 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20bO88575 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Slc6a20bO88575 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20bO88575 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20bO88575 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20bO88575 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc6a20bO88575 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Slc6a20bO88575 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20bO88575 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
Slc6a20bO88575 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20bO88575 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20bO88575 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20bO88575 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20bO88575 Gm13597-201ENSMUST00000121239 375 ntBASIC17.54■□□□□ 0.4
Slc6a20bO88575 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.54■□□□□ 0.4
Slc6a20bO88575 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.54■□□□□ 0.4
Slc6a20bO88575 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20bO88575 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20bO88575 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20bO88575 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20bO88575 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20bO88575 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Slc6a20bO88575 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20bO88575 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20bO88575 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20bO88575 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20bO88575 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.54■□□□□ 0.4
Slc6a20bO88575 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Slc6a20bO88575 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20bO88575 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc6a20bO88575 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a20bO88575 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.53■□□□□ 0.4
Slc6a20bO88575 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a20bO88575 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Slc6a20bO88575 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc6a20bO88575 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms