Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cops4O88544 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.97□□□□□ -0.01
Cops4O88544 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.97□□□□□ -0.01
Cops4O88544 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops4O88544 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops4O88544 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops4O88544 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops4O88544 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops4O88544 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops4O88544 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cops4O88544 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops4O88544 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops4O88544 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cops4O88544 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops4O88544 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops4O88544 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops4O88544 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops4O88544 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops4O88544 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops4O88544 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops4O88544 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops4O88544 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops4O88544 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops4O88544 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops4O88544 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops4O88544 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Cops4O88544 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cops4O88544 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops4O88544 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.96□□□□□ -0.01
Cops4O88544 Gm27000-201ENSMUST00000182943 842 ntBASIC14.96□□□□□ -0.01
Cops4O88544 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.96□□□□□ -0.01
Cops4O88544 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cops4O88544 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cops4O88544 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.96□□□□□ -0.01
Cops4O88544 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cops4O88544 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
Cops4O88544 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cops4O88544 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cops4O88544 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cops4O88544 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cops4O88544 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Cops4O88544 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.96□□□□□ -0.02
Cops4O88544 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cops4O88544 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops4O88544 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops4O88544 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.95□□□□□ -0.02
Cops4O88544 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops4O88544 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cops4O88544 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cops4O88544 Gm10698-201ENSMUST00000182663 604 ntBASIC14.95□□□□□ -0.02
Cops4O88544 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops4O88544 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cops4O88544 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops4O88544 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops4O88544 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops4O88544 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cops4O88544 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cops4O88544 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Cops4O88544 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops4O88544 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops4O88544 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cops4O88544 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.95□□□□□ -0.02
Cops4O88544 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
Cops4O88544 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cops4O88544 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops4O88544 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops4O88544 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops4O88544 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cops4O88544 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops4O88544 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cops4O88544 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Cops4O88544 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.94□□□□□ -0.02
Cops4O88544 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Cops4O88544 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cops4O88544 Gm10653-202ENSMUST00000139570 835 ntBASIC14.94□□□□□ -0.02
Cops4O88544 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Cops4O88544 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cops4O88544 Gm20760-201ENSMUST00000179197 648 ntBASIC14.94□□□□□ -0.02
Cops4O88544 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops4O88544 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops4O88544 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops4O88544 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops4O88544 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cops4O88544 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cops4O88544 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops4O88544 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Cops4O88544 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops4O88544 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops4O88544 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops4O88544 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.94□□□□□ -0.02
Cops4O88544 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cops4O88544 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cops4O88544 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cops4O88544 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.93□□□□□ -0.02
Cops4O88544 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cops4O88544 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cops4O88544 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Cops4O88544 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cops4O88544 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cops4O88544 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms