Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
Ubr1O70481 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC20.85■□□□□ 0.93
Ubr1O70481 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Ubr1O70481 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ubr1O70481 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubr1O70481 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubr1O70481 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubr1O70481 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC20.85■□□□□ 0.93
Ubr1O70481 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20.85■□□□□ 0.93
Ubr1O70481 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Ubr1O70481 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ubr1O70481 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubr1O70481 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.85■□□□□ 0.93
Ubr1O70481 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubr1O70481 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Ubr1O70481 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ubr1O70481 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubr1O70481 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Ubr1O70481 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC20.85■□□□□ 0.93
Ubr1O70481 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubr1O70481 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC20.85■□□□□ 0.93
Ubr1O70481 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ubr1O70481 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ubr1O70481 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ubr1O70481 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ubr1O70481 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ubr1O70481 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ubr1O70481 Gm44492-201ENSMUST00000197012 141 ntBASIC20.84■□□□□ 0.93
Ubr1O70481 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ubr1O70481 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ubr1O70481 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.84■□□□□ 0.93
Ubr1O70481 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ubr1O70481 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Ubr1O70481 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ubr1O70481 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ubr1O70481 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ubr1O70481 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ubr1O70481 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Ubr1O70481 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ubr1O70481 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ubr1O70481 Gm45747-201ENSMUST00000212203 999 ntBASIC20.83■□□□□ 0.93
Ubr1O70481 Gm7787-201ENSMUST00000216858 688 ntBASIC20.83■□□□□ 0.93
Ubr1O70481 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ubr1O70481 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ubr1O70481 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ubr1O70481 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ubr1O70481 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ubr1O70481 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ubr1O70481 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ubr1O70481 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ubr1O70481 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Ubr1O70481 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.83■□□□□ 0.92
Ubr1O70481 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ubr1O70481 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
Ubr1O70481 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubr1O70481 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubr1O70481 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubr1O70481 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubr1O70481 Gm15427-201ENSMUST00000117288 531 ntBASIC20.82■□□□□ 0.92
Ubr1O70481 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC20.82■□□□□ 0.92
Ubr1O70481 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC20.82■□□□□ 0.92
Ubr1O70481 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ubr1O70481 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Ubr1O70481 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubr1O70481 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubr1O70481 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubr1O70481 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubr1O70481 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubr1O70481 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Ubr1O70481 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ubr1O70481 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC20.82■□□□□ 0.92
Ubr1O70481 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC20.82■□□□□ 0.92
Ubr1O70481 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Ubr1O70481 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubr1O70481 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubr1O70481 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubr1O70481 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ubr1O70481 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubr1O70481 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubr1O70481 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubr1O70481 Gm12892-201ENSMUST00000117367 1146 ntBASIC20.81■□□□□ 0.92
Ubr1O70481 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Ubr1O70481 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ubr1O70481 Auts2-212ENSMUST00000178555 309 ntBASIC20.81■□□□□ 0.92
Ubr1O70481 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ubr1O70481 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ubr1O70481 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubr1O70481 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubr1O70481 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubr1O70481 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ubr1O70481 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubr1O70481 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubr1O70481 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Ubr1O70481 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubr1O70481 Gm18246-201ENSMUST00000221023 728 ntBASIC20.8■□□□□ 0.92
Ubr1O70481 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubr1O70481 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubr1O70481 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubr1O70481 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC20.8■□□□□ 0.92
Ubr1O70481 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms