Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.95■□□□□ 0.14
Pdlim1O70400 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim1O70400 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim1O70400 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim1O70400 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pdlim1O70400 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim1O70400 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim1O70400 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim1O70400 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim1O70400 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim1O70400 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim1O70400 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim1O70400 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.95■□□□□ 0.14
Pdlim1O70400 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim1O70400 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.95■□□□□ 0.14
Pdlim1O70400 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.95■□□□□ 0.14
Pdlim1O70400 Gm44454-201ENSMUST00000198541 138 ntBASIC15.95■□□□□ 0.14
Pdlim1O70400 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim1O70400 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pdlim1O70400 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim1O70400 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim1O70400 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pdlim1O70400 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Pdlim1O70400 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim1O70400 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pdlim1O70400 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Pdlim1O70400 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Pdlim1O70400 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim1O70400 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim1O70400 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.94■□□□□ 0.14
Pdlim1O70400 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim1O70400 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim1O70400 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim1O70400 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim1O70400 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim1O70400 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Pdlim1O70400 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim1O70400 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim1O70400 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim1O70400 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim1O70400 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Pdlim1O70400 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Pdlim1O70400 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Pdlim1O70400 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.94■□□□□ 0.14
Pdlim1O70400 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pdlim1O70400 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.94■□□□□ 0.14
Pdlim1O70400 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.94■□□□□ 0.14
Pdlim1O70400 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pdlim1O70400 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim1O70400 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim1O70400 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim1O70400 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim1O70400 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim1O70400 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.93■□□□□ 0.14
Pdlim1O70400 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim1O70400 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim1O70400 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim1O70400 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.93■□□□□ 0.14
Pdlim1O70400 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.93■□□□□ 0.14
Pdlim1O70400 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Pdlim1O70400 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim1O70400 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim1O70400 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim1O70400 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim1O70400 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim1O70400 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pdlim1O70400 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim1O70400 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim1O70400 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pdlim1O70400 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim1O70400 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Pdlim1O70400 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim1O70400 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim1O70400 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim1O70400 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim1O70400 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim1O70400 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim1O70400 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Pdlim1O70400 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim1O70400 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim1O70400 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim1O70400 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim1O70400 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Pdlim1O70400 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Pdlim1O70400 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.92■□□□□ 0.14
Pdlim1O70400 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.92■□□□□ 0.14
Pdlim1O70400 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim1O70400 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim1O70400 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Pdlim1O70400 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pdlim1O70400 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.92■□□□□ 0.14
Pdlim1O70400 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim1O70400 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim1O70400 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim1O70400 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim1O70400 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim1O70400 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pdlim1O70400 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Pdlim1O70400 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.91■□□□□ 0.14
Pdlim1O70400 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms