Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.04□□□□□ -0.32
Ndufb11O09111 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ndufb11O09111 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndufb11O09111 Golgb1-201ENSMUST00000023534 498 ntBASIC13.04□□□□□ -0.32
Ndufb11O09111 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndufb11O09111 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndufb11O09111 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndufb11O09111 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndufb11O09111 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndufb11O09111 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndufb11O09111 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndufb11O09111 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ndufb11O09111 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ndufb11O09111 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.04□□□□□ -0.32
Ndufb11O09111 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ndufb11O09111 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ndufb11O09111 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndufb11O09111 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.04□□□□□ -0.32
Ndufb11O09111 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ndufb11O09111 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ndufb11O09111 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndufb11O09111 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndufb11O09111 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Ndufb11O09111 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndufb11O09111 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndufb11O09111 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndufb11O09111 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndufb11O09111 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ndufb11O09111 Gm13534-201ENSMUST00000121169 513 ntBASIC13.03□□□□□ -0.32
Ndufb11O09111 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ndufb11O09111 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Ndufb11O09111 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndufb11O09111 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndufb11O09111 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndufb11O09111 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndufb11O09111 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndufb11O09111 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndufb11O09111 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndufb11O09111 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndufb11O09111 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ndufb11O09111 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ndufb11O09111 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndufb11O09111 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndufb11O09111 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Ndufb11O09111 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.32
Ndufb11O09111 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.02□□□□□ -0.32
Ndufb11O09111 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndufb11O09111 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndufb11O09111 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndufb11O09111 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndufb11O09111 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ndufb11O09111 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Ndufb11O09111 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.02□□□□□ -0.33
Ndufb11O09111 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndufb11O09111 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndufb11O09111 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC13.02□□□□□ -0.33
Ndufb11O09111 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ndufb11O09111 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC13.02□□□□□ -0.33
Ndufb11O09111 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndufb11O09111 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.02□□□□□ -0.33
Ndufb11O09111 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ndufb11O09111 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ndufb11O09111 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndufb11O09111 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ndufb11O09111 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndufb11O09111 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ndufb11O09111 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndufb11O09111 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.02□□□□□ -0.33
Ndufb11O09111 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndufb11O09111 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ndufb11O09111 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndufb11O09111 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ndufb11O09111 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ndufb11O09111 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ndufb11O09111 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ndufb11O09111 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndufb11O09111 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ndufb11O09111 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndufb11O09111 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndufb11O09111 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndufb11O09111 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndufb11O09111 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.01□□□□□ -0.33
Ndufb11O09111 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.01□□□□□ -0.33
Ndufb11O09111 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.01□□□□□ -0.33
Ndufb11O09111 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ndufb11O09111 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC13.01□□□□□ -0.33
Ndufb11O09111 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ndufb11O09111 Mir6538-201ENSMUST00000183713 110 ntBASIC13.01□□□□□ -0.33
Ndufb11O09111 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndufb11O09111 Gm38285-201ENSMUST00000192928 922 ntBASIC13.01□□□□□ -0.33
Ndufb11O09111 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ndufb11O09111 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndufb11O09111 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.01□□□□□ -0.33
Ndufb11O09111 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ndufb11O09111 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ndufb11O09111 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ndufb11O09111 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.01□□□□□ -0.33
Ndufb11O09111 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.01□□□□□ -0.33
Ndufb11O09111 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ndufb11O09111 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms