Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1O08852 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Pkd1O08852 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1O08852 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1O08852 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1O08852 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1O08852 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1O08852 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1O08852 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1O08852 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1O08852 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1O08852 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.17□□□□□ -0.78
Pkd1O08852 Gm18246-201ENSMUST00000221023 728 ntBASIC10.17□□□□□ -0.78
Pkd1O08852 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1O08852 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Pkd1O08852 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1O08852 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Pkd1O08852 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC10.17□□□□□ -0.78
Pkd1O08852 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1O08852 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1O08852 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Pkd1O08852 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1O08852 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1O08852 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1O08852 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Pkd1O08852 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1O08852 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1O08852 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Pkd1O08852 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1O08852 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1O08852 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Pkd1O08852 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC10.16□□□□□ -0.78
Pkd1O08852 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.16□□□□□ -0.78
Pkd1O08852 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1O08852 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1O08852 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1O08852 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Pkd1O08852 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1O08852 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1O08852 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1O08852 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Pkd1O08852 Gm12151-201ENSMUST00000121374 290 ntBASIC10.16□□□□□ -0.78
Pkd1O08852 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1O08852 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Pkd1O08852 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1O08852 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Pkd1O08852 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1O08852 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1O08852 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC10.16□□□□□ -0.78
Pkd1O08852 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Pkd1O08852 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Pkd1O08852 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.16□□□□□ -0.78
Pkd1O08852 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC10.16□□□□□ -0.78
Pkd1O08852 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC10.16□□□□□ -0.78
Pkd1O08852 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.16□□□□□ -0.78
Pkd1O08852 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC10.16□□□□□ -0.78
Pkd1O08852 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Pkd1O08852 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pkd1O08852 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pkd1O08852 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Pkd1O08852 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC10.15□□□□□ -0.78
Pkd1O08852 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pkd1O08852 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pkd1O08852 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC10.15□□□□□ -0.78
Pkd1O08852 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.15□□□□□ -0.78
Pkd1O08852 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pkd1O08852 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Pkd1O08852 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Pkd1O08852 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Pkd1O08852 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Pkd1O08852 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Pkd1O08852 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Pkd1O08852 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Pkd1O08852 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC10.15□□□□□ -0.78
Pkd1O08852 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Pkd1O08852 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC10.15□□□□□ -0.78
Pkd1O08852 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Pkd1O08852 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Pkd1O08852 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Pkd1O08852 Gm15693-201ENSMUST00000120470 637 ntBASIC10.15□□□□□ -0.79
Pkd1O08852 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.15□□□□□ -0.79
Pkd1O08852 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC10.15□□□□□ -0.79
Pkd1O08852 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC10.15□□□□□ -0.79
Pkd1O08852 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Pkd1O08852 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Pkd1O08852 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Pkd1O08852 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pkd1O08852 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pkd1O08852 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pkd1O08852 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Pkd1O08852 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Pkd1O08852 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pkd1O08852 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pkd1O08852 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC10.14□□□□□ -0.79
Pkd1O08852 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Pkd1O08852 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.14□□□□□ -0.79
Pkd1O08852 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC10.14□□□□□ -0.79
Pkd1O08852 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC10.14□□□□□ -0.79
Pkd1O08852 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Pkd1O08852 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms