Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Gm37500-201ENSMUST00000192059 1443 ntBASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
Trim34bJ3QNR8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Trim34bJ3QNR8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim34bJ3QNR8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim34bJ3QNR8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim34bJ3QNR8 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.71■□□□□ 0.75
Trim34bJ3QNR8 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim34bJ3QNR8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trim34bJ3QNR8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.71■□□□□ 0.75
Trim34bJ3QNR8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.71■□□□□ 0.75
Trim34bJ3QNR8 Gm5364-201ENSMUST00000216789 889 ntBASIC19.71■□□□□ 0.75
Trim34bJ3QNR8 AV026068-213ENSMUST00000223675 1171 ntBASIC19.71■□□□□ 0.75
Trim34bJ3QNR8 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim34bJ3QNR8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.71■□□□□ 0.75
Trim34bJ3QNR8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.71■□□□□ 0.75
Trim34bJ3QNR8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim34bJ3QNR8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim34bJ3QNR8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim34bJ3QNR8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.71■□□□□ 0.75
Trim34bJ3QNR8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim34bJ3QNR8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim34bJ3QNR8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim34bJ3QNR8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trim34bJ3QNR8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim34bJ3QNR8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.7■□□□□ 0.74
Trim34bJ3QNR8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim34bJ3QNR8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.7■□□□□ 0.74
Trim34bJ3QNR8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trim34bJ3QNR8 Gm15590-201ENSMUST00000078419 552 ntBASIC19.7■□□□□ 0.74
Trim34bJ3QNR8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim34bJ3QNR8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim34bJ3QNR8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim34bJ3QNR8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim34bJ3QNR8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim34bJ3QNR8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Trim34bJ3QNR8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim34bJ3QNR8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim34bJ3QNR8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim34bJ3QNR8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim34bJ3QNR8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim34bJ3QNR8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim34bJ3QNR8 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trim34bJ3QNR8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.69■□□□□ 0.74
Trim34bJ3QNR8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.69■□□□□ 0.74
Trim34bJ3QNR8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.69■□□□□ 0.74
Trim34bJ3QNR8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim34bJ3QNR8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim34bJ3QNR8 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.69■□□□□ 0.74
Trim34bJ3QNR8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.69■□□□□ 0.74
Trim34bJ3QNR8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Gm7222-201ENSMUST00000117512 906 ntBASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.68■□□□□ 0.74
Trim34bJ3QNR8 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms