Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dchs1E9PVD3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Dchs1E9PVD3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.24□□□□□ -0.13
Dchs1E9PVD3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Dchs1E9PVD3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dchs1E9PVD3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dchs1E9PVD3 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dchs1E9PVD3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dchs1E9PVD3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dchs1E9PVD3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Dchs1E9PVD3 Gm12428-201ENSMUST00000119844 727 ntBASIC14.23□□□□□ -0.13
Dchs1E9PVD3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Dchs1E9PVD3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.23□□□□□ -0.13
Dchs1E9PVD3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.23□□□□□ -0.13
Dchs1E9PVD3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Dchs1E9PVD3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dchs1E9PVD3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dchs1E9PVD3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dchs1E9PVD3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dchs1E9PVD3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dchs1E9PVD3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.23□□□□□ -0.13
Dchs1E9PVD3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dchs1E9PVD3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dchs1E9PVD3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.23□□□□□ -0.13
Dchs1E9PVD3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Dchs1E9PVD3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.23□□□□□ -0.13
Dchs1E9PVD3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.23□□□□□ -0.13
Dchs1E9PVD3 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Gm14127-201ENSMUST00000117906 678 ntBASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.22□□□□□ -0.13
Dchs1E9PVD3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Dchs1E9PVD3 Gm15653-201ENSMUST00000119247 907 ntBASIC14.21□□□□□ -0.13
Dchs1E9PVD3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Dchs1E9PVD3 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.21□□□□□ -0.13
Dchs1E9PVD3 Gm27300-201ENSMUST00000184085 97 ntBASIC14.21□□□□□ -0.13
Dchs1E9PVD3 Gm27335-201ENSMUST00000184758 97 ntBASIC14.21□□□□□ -0.13
Dchs1E9PVD3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.21□□□□□ -0.13
Dchs1E9PVD3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Dchs1E9PVD3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.21□□□□□ -0.13
Dchs1E9PVD3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dchs1E9PVD3 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dchs1E9PVD3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dchs1E9PVD3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dchs1E9PVD3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Dchs1E9PVD3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dchs1E9PVD3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dchs1E9PVD3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dchs1E9PVD3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dchs1E9PVD3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dchs1E9PVD3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Dchs1E9PVD3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Dchs1E9PVD3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Dchs1E9PVD3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Dchs1E9PVD3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Dchs1E9PVD3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Dchs1E9PVD3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Dchs1E9PVD3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Dchs1E9PVD3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Dchs1E9PVD3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Dchs1E9PVD3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Dchs1E9PVD3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.21□□□□□ -0.14
Dchs1E9PVD3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Dchs1E9PVD3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms