Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm5878E9PUB3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Gm45058-201ENSMUST00000205810 766 ntBASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Gm5878E9PUB3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm5878E9PUB3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Gm5878E9PUB3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.15□□□□□ -0.46
Gm5878E9PUB3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm5878E9PUB3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm5878E9PUB3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm5878E9PUB3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm5878E9PUB3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm5878E9PUB3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Gm5878E9PUB3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Gm5878E9PUB3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Gm5878E9PUB3 Mir5130-201ENSMUST00000175160 84 ntBASIC12.15□□□□□ -0.46
Gm5878E9PUB3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.15□□□□□ -0.46
Gm5878E9PUB3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm5878E9PUB3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm5878E9PUB3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm5878E9PUB3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Gm5878E9PUB3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Gm5878E9PUB3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Gm5878E9PUB3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Gm5878E9PUB3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gm5878E9PUB3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms