Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12-1A0N8R1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trav12-1A0N8R1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trav12-1A0N8R1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav12-1A0N8R1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trav12-1A0N8R1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav12-1A0N8R1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav12-1A0N8R1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-1A0N8R1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-1A0N8R1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.52□□□□□ -0.25
Trav12-1A0N8R1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trav12-1A0N8R1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-1A0N8R1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-1A0N8R1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-1A0N8R1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-1A0N8R1 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.52□□□□□ -0.25
Trav12-1A0N8R1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-1A0N8R1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-1A0N8R1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav12-1A0N8R1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-1A0N8R1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-1A0N8R1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-1A0N8R1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-1A0N8R1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-1A0N8R1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Trav12-1A0N8R1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Trav12-1A0N8R1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav12-1A0N8R1 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Gm16061-201ENSMUST00000122167 857 ntBASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav12-1A0N8R1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Gm11336-201ENSMUST00000118168 334 ntBASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav12-1A0N8R1 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.49□□□□□ -0.25
Trav12-1A0N8R1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms