Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Ccdc112A0AUP1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc112A0AUP1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.5■□□□□ 0.55
Ccdc112A0AUP1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc112A0AUP1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc112A0AUP1 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.5■□□□□ 0.55
Ccdc112A0AUP1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc112A0AUP1 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc112A0AUP1 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc112A0AUP1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc112A0AUP1 Gm37055-201ENSMUST00000191866 133 ntBASIC18.5■□□□□ 0.55
Ccdc112A0AUP1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Ccdc112A0AUP1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc112A0AUP1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc112A0AUP1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc112A0AUP1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc112A0AUP1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc112A0AUP1 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc112A0AUP1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ccdc112A0AUP1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc112A0AUP1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc112A0AUP1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc112A0AUP1 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc112A0AUP1 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ccdc112A0AUP1 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc112A0AUP1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc112A0AUP1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc112A0AUP1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ccdc112A0AUP1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.49■□□□□ 0.55
Ccdc112A0AUP1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ccdc112A0AUP1 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.49■□□□□ 0.55
Ccdc112A0AUP1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.49■□□□□ 0.55
Ccdc112A0AUP1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc112A0AUP1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ccdc112A0AUP1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc112A0AUP1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc112A0AUP1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ccdc112A0AUP1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.49■□□□□ 0.55
Ccdc112A0AUP1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc112A0AUP1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc112A0AUP1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ccdc112A0AUP1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ccdc112A0AUP1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.48■□□□□ 0.55
Ccdc112A0AUP1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc112A0AUP1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ccdc112A0AUP1 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Ccdc112A0AUP1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc112A0AUP1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc112A0AUP1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc112A0AUP1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc112A0AUP1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc112A0AUP1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Ccdc112A0AUP1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ccdc112A0AUP1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Ccdc112A0AUP1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ccdc112A0AUP1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Mir1668-201ENSMUST00000184114 107 ntBASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.47■□□□□ 0.55
Ccdc112A0AUP1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc112A0AUP1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ccdc112A0AUP1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Ccdc112A0AUP1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc112A0AUP1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc112A0AUP1 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc112A0AUP1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc112A0AUP1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc112A0AUP1 Gm13559-201ENSMUST00000120476 863 ntBASIC18.46■□□□□ 0.55
Ccdc112A0AUP1 Gm26039-201ENSMUST00000158152 144 ntBASIC18.46■□□□□ 0.55
Ccdc112A0AUP1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc112A0AUP1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ccdc112A0AUP1 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.46■□□□□ 0.55
Ccdc112A0AUP1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.46■□□□□ 0.55
Ccdc112A0AUP1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms