Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.06■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.06■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.06■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.05■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Gm27867-201ENSMUST00000184778 125 ntBASIC17.05■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.05■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Gm24589-201ENSMUST00000116692 94 ntBASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Gm7153-201ENSMUST00000117092 455 ntBASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Gm12644-201ENSMUST00000119935 606 ntBASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Gm34391-201ENSMUST00000203706 907 ntBASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.02■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Mir6404-201ENSMUST00000183699 94 ntBASIC17.02■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.02■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.02■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Birc2-201ENSMUST00000054878 378 ntBASIC17.02■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mindy4b-psA0A1W2P7H6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms