Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.66■□□□□ 0.42
Gm5580A0A0N4SVP8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5580A0A0N4SVP8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm5580A0A0N4SVP8 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5580A0A0N4SVP8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5580A0A0N4SVP8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5580A0A0N4SVP8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5580A0A0N4SVP8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Gm5580A0A0N4SVP8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5580A0A0N4SVP8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5580A0A0N4SVP8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Gm5580A0A0N4SVP8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gm5580A0A0N4SVP8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5580A0A0N4SVP8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5580A0A0N4SVP8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Gm5580A0A0N4SVP8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.65■□□□□ 0.42
Gm5580A0A0N4SVP8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5580A0A0N4SVP8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5580A0A0N4SVP8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5580A0A0N4SVP8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5580A0A0N4SVP8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5580A0A0N4SVP8 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.65■□□□□ 0.42
Gm5580A0A0N4SVP8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gm5580A0A0N4SVP8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5580A0A0N4SVP8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm5580A0A0N4SVP8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Gm5580A0A0N4SVP8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gm5580A0A0N4SVP8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Gm5417-201ENSMUST00000079706 384 ntBASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm5580A0A0N4SVP8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5580A0A0N4SVP8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5580A0A0N4SVP8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5580A0A0N4SVP8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5580A0A0N4SVP8 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5580A0A0N4SVP8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5580A0A0N4SVP8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.63■□□□□ 0.41
Gm5580A0A0N4SVP8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5580A0A0N4SVP8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Gm5580A0A0N4SVP8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5580A0A0N4SVP8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Gm5580A0A0N4SVP8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Gm5580A0A0N4SVP8 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.63■□□□□ 0.41
Gm5580A0A0N4SVP8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Gm5580A0A0N4SVP8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5580A0A0N4SVP8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Gm5580A0A0N4SVP8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5580A0A0N4SVP8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5580A0A0N4SVP8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5580A0A0N4SVP8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5580A0A0N4SVP8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm5580A0A0N4SVP8 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5580A0A0N4SVP8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Gm5580A0A0N4SVP8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5580A0A0N4SVP8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5580A0A0N4SVP8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5580A0A0N4SVP8 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5580A0A0N4SVP8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5580A0A0N4SVP8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5580A0A0N4SVP8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5580A0A0N4SVP8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5580A0A0N4SVP8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5580A0A0N4SVP8 Gm11336-201ENSMUST00000118168 334 ntBASIC17.62■□□□□ 0.41
Gm5580A0A0N4SVP8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5580A0A0N4SVP8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Gm5580A0A0N4SVP8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5580A0A0N4SVP8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5580A0A0N4SVP8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Gm5580A0A0N4SVP8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5580A0A0N4SVP8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5580A0A0N4SVP8 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5580A0A0N4SVP8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm5580A0A0N4SVP8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm5580A0A0N4SVP8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.61■□□□□ 0.41
Gm5580A0A0N4SVP8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms