Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gm2559-201ENSMUST00000201323 363 ntBASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gm4968-201ENSMUST00000071458 858 ntBASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav9d-4A0A0G2JG37 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gm13148-201ENSMUST00000118892 745 ntBASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gm4974-201ENSMUST00000209974 875 ntBASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 AC122769.4-201ENSMUST00000228166 901 ntBASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9d-4A0A0G2JG37 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms