Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13n-4A0A0G2JG01 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Gm11355-201ENSMUST00000121120 306 ntBASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Gm7461-201ENSMUST00000058918 827 ntBASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav13n-4A0A0G2JG01 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-4A0A0G2JG01 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-4A0A0G2JG01 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-4A0A0G2JG01 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-4A0A0G2JG01 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-4A0A0G2JG01 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-4A0A0G2JG01 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-4A0A0G2JG01 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-4A0A0G2JG01 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.14□□□□□ -0.31
Trav13n-4A0A0G2JG01 Il3ra-202ENSMUST00000223589 738 ntBASIC13.14□□□□□ -0.31
Trav13n-4A0A0G2JG01 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-4A0A0G2JG01 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav13n-4A0A0G2JG01 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-4A0A0G2JG01 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-4A0A0G2JG01 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-4A0A0G2JG01 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-4A0A0G2JG01 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-4A0A0G2JG01 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-4A0A0G2JG01 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-4A0A0G2JG01 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-4A0A0G2JG01 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13n-4A0A0G2JG01 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13n-4A0A0G2JG01 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13n-4A0A0G2JG01 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms