Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Gm33142-201ENSMUST00000193913 867 ntBASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Gm45328-201ENSMUST00000210942 917 ntBASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav9-4A0A0B4J1K2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav9-4A0A0B4J1K2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trav9-4A0A0B4J1K2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Trav9-4A0A0B4J1K2 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trav9-4A0A0B4J1K2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav9-4A0A0B4J1K2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav9-4A0A0B4J1K2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gm14859-201ENSMUST00000117752 357 ntBASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gm36967-201ENSMUST00000193814 266 ntBASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav9-4A0A0B4J1K2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms