Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gm6257-201ENSMUST00000163864 910 ntBASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gm6089-201ENSMUST00000197666 938 ntBASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gm10060-201ENSMUST00000212002 111 ntBASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gm7230-201ENSMUST00000173026 815 ntBASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gm44771-201ENSMUST00000206975 626 ntBASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv5-43A0A0B4J1J2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv5-43A0A0B4J1J2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms