Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sirpb1aA0A0A6YYP6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Sirpb1aA0A0A6YYP6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.36■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.36■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.36■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Gm13186-201ENSMUST00000118031 316 ntBASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.33■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sirpb1aA0A0A6YYP6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.33■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Mir6982-201ENSMUST00000184354 68 ntBASIC15.33■□□□□ 0.04
Sirpb1aA0A0A6YYP6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.33■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sirpb1aA0A0A6YYP6 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms