Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-42A0A0A6YY38 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ighv1-42A0A0A6YY38 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.9□□□□□ -0.02
Ighv1-42A0A0A6YY38 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-42A0A0A6YY38 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-42A0A0A6YY38 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-42A0A0A6YY38 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-42A0A0A6YY38 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.9□□□□□ -0.02
Ighv1-42A0A0A6YY38 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-42A0A0A6YY38 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-42A0A0A6YY38 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-42A0A0A6YY38 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-42A0A0A6YY38 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-42A0A0A6YY38 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-42A0A0A6YY38 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-42A0A0A6YY38 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-42A0A0A6YY38 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.89□□□□□ -0.03
Ighv1-42A0A0A6YY38 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-42A0A0A6YY38 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.89□□□□□ -0.03
Ighv1-42A0A0A6YY38 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.89□□□□□ -0.03
Ighv1-42A0A0A6YY38 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-42A0A0A6YY38 Gm6550-201ENSMUST00000187574 993 ntBASIC14.89□□□□□ -0.03
Ighv1-42A0A0A6YY38 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.89□□□□□ -0.03
Ighv1-42A0A0A6YY38 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.89□□□□□ -0.03
Ighv1-42A0A0A6YY38 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ighv1-42A0A0A6YY38 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Ighv1-42A0A0A6YY38 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-42A0A0A6YY38 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.89□□□□□ -0.03
Ighv1-42A0A0A6YY38 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-42A0A0A6YY38 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-42A0A0A6YY38 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Gm7222-201ENSMUST00000117512 906 ntBASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Gm5364-201ENSMUST00000216789 889 ntBASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-42A0A0A6YY38 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-42A0A0A6YY38 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-42A0A0A6YY38 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-42A0A0A6YY38 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-42A0A0A6YY38 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.86□□□□□ -0.03
Ighv1-42A0A0A6YY38 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Ighv1-42A0A0A6YY38 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-42A0A0A6YY38 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ighv1-42A0A0A6YY38 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ighv1-42A0A0A6YY38 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.86□□□□□ -0.03
Ighv1-42A0A0A6YY38 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms