Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-3A0A075B6A4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-3A0A075B6A4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-3A0A075B6A4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-3A0A075B6A4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-3A0A075B6A4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-3A0A075B6A4 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav12d-3A0A075B6A4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-3A0A075B6A4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Trav12d-3A0A075B6A4 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.12□□□□□ -0.47
Trav12d-3A0A075B6A4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-3A0A075B6A4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-3A0A075B6A4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-3A0A075B6A4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12d-3A0A075B6A4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.12□□□□□ -0.47
Trav12d-3A0A075B6A4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.11□□□□□ -0.47
Trav12d-3A0A075B6A4 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav12d-3A0A075B6A4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav12d-3A0A075B6A4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms