Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav18A0A075B656 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.27□□□□□ -0.28
Trav18A0A075B656 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trav18A0A075B656 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Trav18A0A075B656 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Trav18A0A075B656 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav18A0A075B656 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.27□□□□□ -0.28
Trav18A0A075B656 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.27□□□□□ -0.29
Trav18A0A075B656 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Gm2274-201ENSMUST00000184539 609 ntBASIC13.27□□□□□ -0.29
Trav18A0A075B656 Gm7213-201ENSMUST00000215977 950 ntBASIC13.27□□□□□ -0.29
Trav18A0A075B656 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav18A0A075B656 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Trav18A0A075B656 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav18A0A075B656 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav18A0A075B656 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav18A0A075B656 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav18A0A075B656 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav18A0A075B656 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Trav18A0A075B656 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav18A0A075B656 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav18A0A075B656 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav18A0A075B656 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav18A0A075B656 Gm16061-201ENSMUST00000122167 857 ntBASIC13.26□□□□□ -0.29
Trav18A0A075B656 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav18A0A075B656 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.26□□□□□ -0.29
Trav18A0A075B656 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav18A0A075B656 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav18A0A075B656 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav18A0A075B656 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav18A0A075B656 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav18A0A075B656 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav18A0A075B656 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav18A0A075B656 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav18A0A075B656 Prob1-201ENSMUST00000097619 3021 ntBASIC13.26□□□□□ -0.29
Trav18A0A075B656 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav18A0A075B656 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav18A0A075B656 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.25□□□□□ -0.29
Trav18A0A075B656 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.25□□□□□ -0.29
Trav18A0A075B656 Gm13436-201ENSMUST00000120418 567 ntBASIC13.25□□□□□ -0.29
Trav18A0A075B656 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Gm37055-201ENSMUST00000191866 133 ntBASIC13.25□□□□□ -0.29
Trav18A0A075B656 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.25□□□□□ -0.29
Trav18A0A075B656 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trav18A0A075B656 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.25□□□□□ -0.29
Trav18A0A075B656 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav18A0A075B656 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms