Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav4-4-dv10A0A075B651 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav4-4-dv10A0A075B651 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Gm27463-201ENSMUST00000183569 57 ntBASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav4-4-dv10A0A075B651 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-4-dv10A0A075B651 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-4-dv10A0A075B651 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-4-dv10A0A075B651 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-4-dv10A0A075B651 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-4-dv10A0A075B651 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-4-dv10A0A075B651 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-4-dv10A0A075B651 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-4-dv10A0A075B651 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-4-dv10A0A075B651 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-4-dv10A0A075B651 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-4-dv10A0A075B651 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-4-dv10A0A075B651 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav4-4-dv10A0A075B651 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms