Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-6A0A075B603 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 Gm17661-201ENSMUST00000170317 270 ntBASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-6A0A075B603 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav6-6A0A075B603 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav6-6A0A075B603 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav6-6A0A075B603 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav6-6A0A075B603 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Gm12527-201ENSMUST00000117967 564 ntBASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-6A0A075B603 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-6A0A075B603 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav6-6A0A075B603 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav6-6A0A075B603 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-6A0A075B603 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-6A0A075B603 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-6A0A075B603 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-6A0A075B603 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-6A0A075B603 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav6-6A0A075B603 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-6A0A075B603 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-6A0A075B603 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-6A0A075B603 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-6A0A075B603 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
Trav6-6A0A075B603 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-6A0A075B603 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-6A0A075B603 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-6A0A075B603 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-6A0A075B603 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-6A0A075B603 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-6A0A075B603 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-6A0A075B603 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-6A0A075B603 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms