Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 AC107068.1-201ENST00000563286 4218 ntBASIC3.68□□□□□ -1.82
U3KQE9 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.68□□□□□ -1.82
U3KQE9 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.68□□□□□ -1.82
U3KQE9 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
U3KQE9 SNORA51.1-201ENST00000363243 140 ntBASIC3.68□□□□□ -1.82
U3KQE9 RNU1-83P-201ENST00000363426 164 ntBASIC3.68□□□□□ -1.82
U3KQE9 RNU6-1325P-201ENST00000364905 105 ntBASIC3.68□□□□□ -1.82
U3KQE9 RNU1-64P-201ENST00000365443 163 ntBASIC3.68□□□□□ -1.82
U3KQE9 Y_RNA.563-201ENST00000384707 108 ntBASIC3.68□□□□□ -1.82
U3KQE9 MIR195-201ENST00000385194 87 ntBASIC3.68□□□□□ -1.82
U3KQE9 RNU6ATAC7P-201ENST00000408111 127 ntBASIC3.68□□□□□ -1.82
U3KQE9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.68□□□□□ -1.82
U3KQE9 AC114755.2-201ENST00000413520 361 ntBASIC3.68□□□□□ -1.82
U3KQE9 AC010154.1-201ENST00000425857 269 ntBASIC3.68□□□□□ -1.82
U3KQE9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.68□□□□□ -1.82
U3KQE9 TPT1P12-201ENST00000448968 492 ntBASIC3.68□□□□□ -1.82
U3KQE9 AC091179.1-201ENST00000461606 579 ntBASIC3.68□□□□□ -1.82
U3KQE9 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.68□□□□□ -1.82
U3KQE9 AC008953.1-201ENST00000497334 318 ntBASIC3.68□□□□□ -1.82
U3KQE9 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.68□□□□□ -1.82
U3KQE9 AC021269.2-201ENST00000532318 330 ntBASIC3.68□□□□□ -1.82
U3KQE9 AC027176.1-201ENST00000560204 514 ntBASIC3.68□□□□□ -1.82
U3KQE9 AL390726.5-202ENST00000564800 256 ntBASIC3.68□□□□□ -1.82
U3KQE9 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.68□□□□□ -1.82
U3KQE9 IPO5P1-202ENST00000600039 287 ntBASIC3.68□□□□□ -1.82
U3KQE9 AC100827.5-201ENST00000615883 426 ntBASIC3.68□□□□□ -1.82
U3KQE9 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
U3KQE9 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.68□□□□□ -1.82
U3KQE9 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
U3KQE9 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.68□□□□□ -1.82
U3KQE9 AP001642.1-201ENST00000624727 2117 ntBASIC3.68□□□□□ -1.82
U3KQE9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.68□□□□□ -1.82
U3KQE9 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
U3KQE9 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC3.68□□□□□ -1.82
U3KQE9 TLK1P1-201ENST00000456760 2440 ntBASIC3.68□□□□□ -1.82
U3KQE9 A2MP1-204ENST00000566278 4130 ntBASIC3.68□□□□□ -1.82
U3KQE9 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
U3KQE9 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
U3KQE9 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
U3KQE9 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.67□□□□□ -1.82
U3KQE9 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC3.67□□□□□ -1.82
U3KQE9 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
U3KQE9 Y_RNA.172-201ENST00000363765 102 ntBASIC3.67□□□□□ -1.82
U3KQE9 MIR607-201ENST00000385241 96 ntBASIC3.67□□□□□ -1.82
U3KQE9 MIR616-201ENST00000385293 97 ntBASIC3.67□□□□□ -1.82
U3KQE9 MIR526A2-201ENST00000390198 65 ntBASIC3.67□□□□□ -1.82
U3KQE9 U3.26-201ENST00000391236 204 ntBASIC3.67□□□□□ -1.82
U3KQE9 HSPE1P12-201ENST00000412576 301 ntBASIC3.67□□□□□ -1.82
U3KQE9 AC093162.1-201ENST00000419682 124 ntBASIC3.67□□□□□ -1.82
U3KQE9 AC099548.1-201ENST00000421443 426 ntBASIC3.67□□□□□ -1.82
U3KQE9 AL591419.1-201ENST00000427423 339 ntBASIC3.67□□□□□ -1.82
U3KQE9 RPS26P2-201ENST00000440331 348 ntBASIC3.67□□□□□ -1.82
U3KQE9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.67□□□□□ -1.82
U3KQE9 RNA5SP103-201ENST00000459503 118 ntBASIC3.67□□□□□ -1.82
U3KQE9 AC090525.1-201ENST00000479116 478 ntBASIC3.67□□□□□ -1.82
U3KQE9 AC023141.12-201ENST00000512399 199 ntBASIC3.67□□□□□ -1.82
U3KQE9 RNU6-344P-201ENST00000516635 111 ntBASIC3.67□□□□□ -1.82
U3KQE9 AC109810.1-201ENST00000534066 224 ntBASIC3.67□□□□□ -1.82
U3KQE9 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.67□□□□□ -1.82
U3KQE9 MIR3646-201ENST00000578301 84 ntBASIC3.67□□□□□ -1.82
U3KQE9 AL512624.1-201ENST00000613638 469 ntBASIC3.67□□□□□ -1.82
U3KQE9 Y_RNA.802-201ENST00000614892 130 ntBASIC3.67□□□□□ -1.82
U3KQE9 AL021997.2-201ENST00000615674 271 ntBASIC3.67□□□□□ -1.82
U3KQE9 MIR6826-201ENST00000617808 98 ntBASIC3.67□□□□□ -1.82
U3KQE9 MIR6729-201ENST00000618194 65 ntBASIC3.67□□□□□ -1.82
U3KQE9 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.67□□□□□ -1.82
U3KQE9 AL354798.1-201ENST00000622505 329 ntBASIC3.67□□□□□ -1.82
U3KQE9 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.67□□□□□ -1.82
U3KQE9 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
U3KQE9 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
U3KQE9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
U3KQE9 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.67□□□□□ -1.82
U3KQE9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
U3KQE9 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
U3KQE9 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
U3KQE9 AC010329.5-201ENST00000623497 2174 ntBASIC3.66□□□□□ -1.82
U3KQE9 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
U3KQE9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
U3KQE9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
U3KQE9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
U3KQE9 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
U3KQE9 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
U3KQE9 RNU6-324P-201ENST00000363957 106 ntBASIC3.66□□□□□ -1.82
U3KQE9 RNU6-801P-201ENST00000364087 105 ntBASIC3.66□□□□□ -1.82
U3KQE9 RNU6-818P-201ENST00000364837 108 ntBASIC3.66□□□□□ -1.82
U3KQE9 SNORA1.3-201ENST00000384676 136 ntBASIC3.66□□□□□ -1.82
U3KQE9 RPL21P17-201ENST00000397467 475 ntBASIC3.66□□□□□ -1.82
U3KQE9 MIR208B-201ENST00000401172 77 ntBASIC3.66□□□□□ -1.82
U3KQE9 RN7SKP229-201ENST00000410465 302 ntBASIC3.66□□□□□ -1.82
U3KQE9 RN7SKP125-201ENST00000410481 302 ntBASIC3.66□□□□□ -1.82
U3KQE9 BX510359.2-201ENST00000417920 305 ntBASIC3.66□□□□□ -1.82
U3KQE9 BPY2DP-201ENST00000422208 265 ntBASIC3.66□□□□□ -1.82
U3KQE9 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.66□□□□□ -1.82
U3KQE9 U8.19-201ENST00000459095 133 ntBASIC3.66□□□□□ -1.82
U3KQE9 AC084357.1-201ENST00000473404 255 ntBASIC3.66□□□□□ -1.82
U3KQE9 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.66□□□□□ -1.82
U3KQE9 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.66□□□□□ -1.82
U3KQE9 RNA5SP272-201ENST00000516095 111 ntBASIC3.66□□□□□ -1.82
U3KQE9 RN7SKP179-201ENST00000516126 217 ntBASIC3.66□□□□□ -1.82
U3KQE9 SNORA31.16-201ENST00000516773 139 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms