Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 MIR4648-201ENST00000580107 72 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 AC091805.2-201ENST00000603848 235 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 AC245884.12-201ENST00000615364 59 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 AC005609.4-201ENST00000625071 447 ntBASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
PCDHGA1Q9Y5H4 RNU6-1287P-201ENST00000362914 107 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 RNU4-24P-201ENST00000364565 139 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 RNA5SP240-201ENST00000365355 128 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 RNU6-116P-201ENST00000384042 109 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 RNU6-1029P-201ENST00000384109 107 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 RNU6-1060P-201ENST00000384664 107 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 MIR524-201ENST00000385242 87 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 RNU6-550P-201ENST00000391057 101 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 RNU2-66P-201ENST00000410650 161 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 AC003685.2-201ENST00000422795 395 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 RPL30P4-201ENST00000429309 333 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 AC073464.1-201ENST00000429823 534 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 AL627311.1-201ENST00000431514 115 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 AL596276.1-201ENST00000434465 418 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 AC004383.1-201ENST00000438135 289 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 AC011753.1-201ENST00000451001 220 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 CYP2C59P-201ENST00000457790 269 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 AL162395.1-201ENST00000457882 422 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 Y_RNA.638-201ENST00000459374 113 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 AC079382.1-201ENST00000493346 557 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 HMGB1P29-201ENST00000505659 499 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 RNA5SP503-201ENST00000517047 117 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 AP005902.1-201ENST00000521358 186 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 AC243972.3-201ENST00000539655 198 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 MIR5692A1-201ENST00000580523 69 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 AL391646.1-201ENST00000603860 190 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 MIR5739-201ENST00000619803 80 ntBASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.5□□□□□ -2.01
PCDHGA1Q9Y5H4 Z75746.1-201ENST00000440243 2080 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 SNORD3E-201ENST00000362899 217 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 Y_RNA.296-201ENST00000364930 108 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 RNU6-1179P-201ENST00000384667 107 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 U3.37-201ENST00000408528 213 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 RNU2-9P-201ENST00000410194 145 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 RPL21P90-201ENST00000415692 466 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 AC016907.1-201ENST00000419483 435 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 MTCO2P19-201ENST00000427513 598 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 AL139109.1-201ENST00000455491 297 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 AL356010.1-201ENST00000456364 102 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 snoU13.23-201ENST00000458863 104 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 AC006512.1-201ENST00000468816 291 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 AC105417.1-201ENST00000514691 285 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 RN7SKP24-201ENST00000515888 284 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 RNA5SP320-201ENST00000516263 124 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 AP003392.2-201ENST00000527269 208 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 AC079598.5-201ENST00000547460 117 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 AL133241.1-201ENST00000556832 487 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 AC092325.1-201ENST00000566449 554 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 U4atac.1-201ENST00000618345 95 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 MIR203B-201ENST00000636080 86 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 MIR3529-201ENST00000637713 78 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 ZNF680P1-201ENST00000436625 1469 ntBASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
PCDHGA1Q9Y5H4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 RNU1-100P-201ENST00000365255 165 ntBASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 OR5H15-201ENST00000383696 930 ntBASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 RNU2-16P-201ENST00000410712 136 ntBASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 AC010975.2-201ENST00000427781 588 ntBASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 AC000111.3-201ENST00000433478 193 ntBASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 AC002486.1-201ENST00000435098 391 ntBASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 RPL7P12-201ENST00000446719 750 ntBASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 RPS29P15-201ENST00000458329 171 ntBASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 GMFBP1-201ENST00000467831 427 ntBASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 MTCO3P7-201ENST00000510008 774 ntBASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 ELOCP31-201ENST00000540463 467 ntBASIC2.48□□□□□ -2.01
PCDHGA1Q9Y5H4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms