Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC093536.2-201ENST00000565257 1406 ntBASIC2.76□□□□□ -1.97
YIPF1Q9Y548 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
YIPF1Q9Y548 SNORA51.4-201ENST00000364993 124 ntBASIC2.75□□□□□ -1.97
YIPF1Q9Y548 Y_RNA.373-201ENST00000365600 103 ntBASIC2.75□□□□□ -1.97
YIPF1Q9Y548 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.75□□□□□ -1.97
YIPF1Q9Y548 RNU2-3P-201ENST00000410144 191 ntBASIC2.75□□□□□ -1.97
YIPF1Q9Y548 POLHP1-201ENST00000411806 470 ntBASIC2.75□□□□□ -1.97
YIPF1Q9Y548 ATG3P1-201ENST00000419507 911 ntBASIC2.75□□□□□ -1.97
YIPF1Q9Y548 PGBD4P6-201ENST00000421501 610 ntBASIC2.75□□□□□ -1.97
YIPF1Q9Y548 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.75□□□□□ -1.97
YIPF1Q9Y548 HMGB1P31-201ENST00000437242 427 ntBASIC2.75□□□□□ -1.97
YIPF1Q9Y548 RNU7-167P-201ENST00000459160 62 ntBASIC2.75□□□□□ -1.97
YIPF1Q9Y548 snoU109.2-201ENST00000459316 135 ntBASIC2.75□□□□□ -1.97
YIPF1Q9Y548 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.75□□□□□ -1.97
YIPF1Q9Y548 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.75□□□□□ -1.97
YIPF1Q9Y548 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.75□□□□□ -1.97
YIPF1Q9Y548 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.75□□□□□ -1.97
YIPF1Q9Y548 LINC00933-203ENST00000559812 219 ntBASIC2.75□□□□□ -1.97
YIPF1Q9Y548 AC092747.3-201ENST00000603769 301 ntBASIC2.75□□□□□ -1.97
YIPF1Q9Y548 NUTF2P8-201ENST00000604593 363 ntBASIC2.75□□□□□ -1.97
YIPF1Q9Y548 U2.17-201ENST00000611454 95 ntBASIC2.75□□□□□ -1.97
YIPF1Q9Y548 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.75□□□□□ -1.97
YIPF1Q9Y548 AC100810.6-201ENST00000638068 285 ntBASIC2.75□□□□□ -1.97
YIPF1Q9Y548 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
YIPF1Q9Y548 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
YIPF1Q9Y548 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
YIPF1Q9Y548 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 RNU6-522P-201ENST00000364497 107 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 SNORD14B-201ENST00000364533 90 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 MIR10A-201ENST00000385043 110 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 RNU6-373P-201ENST00000411247 98 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 RNA5SP508-201ENST00000411327 119 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 RPLP0P7-201ENST00000416050 667 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 AL627311.1-201ENST00000431514 115 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 AC098831.1-201ENST00000440661 216 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 AL590639.1-201ENST00000456484 337 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 HMGN2P26-201ENST00000463169 339 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 RPL31P58-201ENST00000469001 379 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 AC083904.1-201ENST00000487828 231 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 HMGB1P30-201ENST00000492455 606 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 MIR892C-201ENST00000516410 77 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 SNORA31.26-201ENST00000517250 137 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.74□□□□□ -1.97
YIPF1Q9Y548 AF235103.2-201ENST00000525753 346 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 AC243972.3-201ENST00000539655 198 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 NACAP3-201ENST00000552100 481 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 AC091544.4-201ENST00000555268 342 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.74□□□□□ -1.97
YIPF1Q9Y548 AC027176.1-201ENST00000560204 514 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.74□□□□□ -1.97
YIPF1Q9Y548 LRRC37A5P-203ENST00000580181 585 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 VN1R80P-201ENST00000597126 338 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 AL645944.1-201ENST00000603857 493 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 AC002044.1-201ENST00000606707 158 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 AC116312.1-201ENST00000606841 314 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.74□□□□□ -1.97
YIPF1Q9Y548 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.74□□□□□ -1.97
YIPF1Q9Y548 AC090617.7-201ENST00000623952 126 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.74□□□□□ -1.97
YIPF1Q9Y548 AC110491.1-201ENST00000562191 2010 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
YIPF1Q9Y548 AC091564.4-201ENST00000533934 2194 ntBASIC2.74□□□□□ -1.97
YIPF1Q9Y548 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
YIPF1Q9Y548 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
YIPF1Q9Y548 Y_RNA.167-201ENST00000363735 109 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 RNU6-82P-201ENST00000363970 107 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 RNU6-898P-201ENST00000365627 104 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 Y_RNA.390-201ENST00000383932 102 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 SNORA67.4-201ENST00000384688 142 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 RNU4-26P-201ENST00000410270 107 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 RN7SKP123-201ENST00000410732 291 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 BMS1P22-201ENST00000414726 313 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 AL365496.1-201ENST00000426885 215 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 NDUFB1P2-201ENST00000449477 176 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 RNU6-1208P-201ENST00000459588 107 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 RPS29P12-201ENST00000460178 152 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 AC087884.1-201ENST00000469738 328 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 AC011005.2-201ENST00000487324 359 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 Y_RNA.654-201ENST00000497848 106 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.73□□□□□ -1.97
YIPF1Q9Y548 RNU6-189P-201ENST00000516120 101 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 Y_RNA.665-201ENST00000516177 98 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 RNA5SP320-201ENST00000516263 124 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 AC090115.3-201ENST00000553218 849 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 AC021739.1-201ENST00000559631 174 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 MIR3945-201ENST00000581853 98 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 MTND5P19-201ENST00000424872 1794 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 CASC19-280ENST00000642102 1351 ntBASIC2.73□□□□□ -1.97
YIPF1Q9Y548 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
YIPF1Q9Y548 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.72□□□□□ -1.97
YIPF1Q9Y548 Y_RNA.86-201ENST00000363020 111 ntBASIC2.72□□□□□ -1.97
YIPF1Q9Y548 Y_RNA.324-201ENST00000365165 102 ntBASIC2.72□□□□□ -1.97
YIPF1Q9Y548 RNA5SP118-201ENST00000410385 109 ntBASIC2.72□□□□□ -1.97
YIPF1Q9Y548 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.72□□□□□ -1.97
YIPF1Q9Y548 AC016831.2-201ENST00000417179 352 ntBASIC2.72□□□□□ -1.97
YIPF1Q9Y548 ARL5AP1-201ENST00000418991 388 ntBASIC2.72□□□□□ -1.97
YIPF1Q9Y548 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.72□□□□□ -1.97
YIPF1Q9Y548 HMGB1P9-201ENST00000429856 646 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms