Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.73□□□□□ -1.81
USP25Q9UHP3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.73□□□□□ -1.81
USP25Q9UHP3 AL133393.1-201ENST00000603277 287 ntBASIC3.73□□□□□ -1.81
USP25Q9UHP3 AC116312.1-201ENST00000606841 314 ntBASIC3.73□□□□□ -1.81
USP25Q9UHP3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.73□□□□□ -1.81
USP25Q9UHP3 AL355365.1-201ENST00000616480 294 ntBASIC3.73□□□□□ -1.81
USP25Q9UHP3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.73□□□□□ -1.81
USP25Q9UHP3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
USP25Q9UHP3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
USP25Q9UHP3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.72□□□□□ -1.81
USP25Q9UHP3 MTND5P10-201ENST00000603719 1809 ntBASIC3.72□□□□□ -1.81
USP25Q9UHP3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
USP25Q9UHP3 GABRG2-229ENST00000641017 3628 ntBASIC3.72□□□□□ -1.81
USP25Q9UHP3 RNA5SP119-201ENST00000362715 117 ntBASIC3.72□□□□□ -1.81
USP25Q9UHP3 Y_RNA.480-201ENST00000384364 102 ntBASIC3.72□□□□□ -1.81
USP25Q9UHP3 RNU6-601P-201ENST00000384540 107 ntBASIC3.72□□□□□ -1.81
USP25Q9UHP3 MIR218-2-201ENST00000385006 110 ntBASIC3.72□□□□□ -1.81
USP25Q9UHP3 YME1L1P1-201ENST00000429435 297 ntBASIC3.72□□□□□ -1.81
USP25Q9UHP3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.72□□□□□ -1.81
USP25Q9UHP3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.72□□□□□ -1.81
USP25Q9UHP3 TBCAP3-201ENST00000512475 312 ntBASIC3.72□□□□□ -1.81
USP25Q9UHP3 RNU6-1016P-201ENST00000516689 94 ntBASIC3.72□□□□□ -1.81
USP25Q9UHP3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.72□□□□□ -1.81
USP25Q9UHP3 H3F3AP1-201ENST00000559984 334 ntBASIC3.72□□□□□ -1.81
USP25Q9UHP3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.72□□□□□ -1.81
USP25Q9UHP3 AC100830.2-201ENST00000581636 240 ntBASIC3.72□□□□□ -1.81
USP25Q9UHP3 HMGN2P15-201ENST00000585707 270 ntBASIC3.72□□□□□ -1.81
USP25Q9UHP3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.72□□□□□ -1.81
USP25Q9UHP3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USP25Q9UHP3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.72□□□□□ -1.81
USP25Q9UHP3 AC010378.1-201ENST00000619270 362 ntBASIC3.72□□□□□ -1.81
USP25Q9UHP3 AC244517.12-201ENST00000623581 663 ntBASIC3.72□□□□□ -1.81
USP25Q9UHP3 AL034408.1-202ENST00000636088 415 ntBASIC3.72□□□□□ -1.81
USP25Q9UHP3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
USP25Q9UHP3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
USP25Q9UHP3 MIR208A-201ENST00000362287 71 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 SNORA63.1-201ENST00000362493 131 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 Y_RNA.112-201ENST00000363250 102 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 RNA5SP387-201ENST00000364226 106 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 CD24P4-201ENST00000382840 243 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 SNORA46-201ENST00000384762 135 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 AC245054.2-201ENST00000415639 319 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 RPL7P37-201ENST00000425095 738 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 AC244505.4-201ENST00000434905 287 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 SSXP5-201ENST00000443473 287 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.71□□□□□ -1.82
USP25Q9UHP3 AL137792.2-201ENST00000443484 235 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.71□□□□□ -1.82
USP25Q9UHP3 RPL21P13-201ENST00000488305 481 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 RPS29P20-201ENST00000489592 171 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 AC009901.1-201ENST00000506703 541 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 AC009902.1-201ENST00000519351 183 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 AC025755.1-201ENST00000521306 278 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 SNRPGP18-201ENST00000553000 214 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.71□□□□□ -1.82
USP25Q9UHP3 MIR548AC-201ENST00000585049 88 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 AC012119.1-201ENST00000603184 222 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 AL157817.1-201ENST00000614264 790 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 AC133104.2-201ENST00000615272 193 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.71□□□□□ -1.82
USP25Q9UHP3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.71□□□□□ -1.82
USP25Q9UHP3 uc_338.22-201ENST00000622722 187 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
USP25Q9UHP3 U6.99-201ENST00000637524 83 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 FAM35CP-201ENST00000554755 2470 ntBASIC3.71□□□□□ -1.82
USP25Q9UHP3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
USP25Q9UHP3 RNU1-105P-201ENST00000363470 161 ntBASIC3.7□□□□□ -1.82
USP25Q9UHP3 Y_RNA.216-201ENST00000364205 93 ntBASIC3.7□□□□□ -1.82
USP25Q9UHP3 SNORA51.4-201ENST00000364993 124 ntBASIC3.7□□□□□ -1.82
USP25Q9UHP3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP25Q9UHP3 RNU6-1027P-201ENST00000383998 107 ntBASIC3.7□□□□□ -1.82
USP25Q9UHP3 RNU6-658P-201ENST00000384606 106 ntBASIC3.7□□□□□ -1.82
USP25Q9UHP3 RNA5SP229-201ENST00000410809 99 ntBASIC3.7□□□□□ -1.82
USP25Q9UHP3 RNU6-1304P-201ENST00000411374 106 ntBASIC3.7□□□□□ -1.82
USP25Q9UHP3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.7□□□□□ -1.82
USP25Q9UHP3 AC098614.2-201ENST00000426040 255 ntBASIC3.7□□□□□ -1.82
USP25Q9UHP3 RPL23AP83-201ENST00000434984 473 ntBASIC3.7□□□□□ -1.82
USP25Q9UHP3 AL359672.1-201ENST00000442302 409 ntBASIC3.7□□□□□ -1.82
USP25Q9UHP3 AC128713.1-201ENST00000471495 306 ntBASIC3.7□□□□□ -1.82
USP25Q9UHP3 RPS27AP10-201ENST00000496103 208 ntBASIC3.7□□□□□ -1.82
USP25Q9UHP3 AC093663.1-201ENST00000497190 394 ntBASIC3.7□□□□□ -1.82
USP25Q9UHP3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.7□□□□□ -1.82
USP25Q9UHP3 AC116337.1-201ENST00000509680 687 ntBASIC3.7□□□□□ -1.82
USP25Q9UHP3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.7□□□□□ -1.82
USP25Q9UHP3 AC087854.1-201ENST00000519706 414 ntBASIC3.7□□□□□ -1.82
USP25Q9UHP3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.7□□□□□ -1.82
USP25Q9UHP3 MIR5692A1-201ENST00000580523 69 ntBASIC3.7□□□□□ -1.82
USP25Q9UHP3 AC007938.3-201ENST00000604965 623 ntBASIC3.7□□□□□ -1.82
USP25Q9UHP3 AC004832.5-201ENST00000608677 401 ntBASIC3.7□□□□□ -1.82
USP25Q9UHP3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.7□□□□□ -1.82
USP25Q9UHP3 AC040896.1-201ENST00000613819 479 ntBASIC3.7□□□□□ -1.82
USP25Q9UHP3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP25Q9UHP3 AC091564.4-201ENST00000533934 2194 ntBASIC3.69□□□□□ -1.82
USP25Q9UHP3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.69□□□□□ -1.82
USP25Q9UHP3 KPNA2P1-201ENST00000458289 1591 ntBASIC3.69□□□□□ -1.82
USP25Q9UHP3 RNU1-70P-201ENST00000362618 164 ntBASIC3.69□□□□□ -1.82
USP25Q9UHP3 SNORD3E-201ENST00000362899 217 ntBASIC3.69□□□□□ -1.82
USP25Q9UHP3 RNU6-266P-201ENST00000364225 107 ntBASIC3.69□□□□□ -1.82
USP25Q9UHP3 RNA5SP139-201ENST00000364340 117 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms