Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 MTAPP1-201ENST00000489154 819 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 AC079382.1-201ENST00000493346 557 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 AC107401.1-201ENST00000503426 685 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 AC092436.1-201ENST00000506450 503 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 AP004607.1-201ENST00000524456 203 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 MIR4703-201ENST00000577728 79 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 AC008752.3-201ENST00000588113 712 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 AC008121.1-201ENST00000603244 268 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 AC008945.2-201ENST00000606056 604 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 AP001596.2-201ENST00000608410 312 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 AC015540.1-201ENST00000615828 501 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 RMST_4.1-201ENST00000616886 107 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 AC135776.4-201ENST00000624300 1904 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 MIR6863-201ENST00000636112 90 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 AC007336.1-201ENST00000576365 3828 ntBASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
SMC4Q9NTJ3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 ZNF271P-202ENST00000465539 1970 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 MTND4P27-201ENST00000450813 1354 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 AL139276.1-201ENST00000311910 1001 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 OR4G2P-201ENST00000328113 903 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 RNU1-51P-201ENST00000365345 176 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 RNU6-1029P-201ENST00000384109 107 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 RNU6-780P-201ENST00000391030 104 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 CIR1P3-201ENST00000405137 479 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 MTCO1P21-201ENST00000416634 589 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 AC016831.2-201ENST00000417179 352 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 AC000111.3-201ENST00000433478 193 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 AL118520.1-201ENST00000450770 291 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 AC104136.1-201ENST00000512969 394 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 RNU5B-3P-201ENST00000516601 115 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 SCARNA3-201ENST00000517097 143 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 AC021269.2-201ENST00000532318 330 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 AC092954.2-201ENST00000609103 430 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 AC046143.2-201ENST00000609789 160 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 AL449363.1-201ENST00000617815 186 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 AC010378.1-201ENST00000619270 362 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 AC244517.12-201ENST00000623581 663 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 AC124864.2-201ENST00000624736 186 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 SCARNA4-202ENST00000625402 129 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 AC016717.2-201ENST00000609089 5141 ntBASIC3.05□□□□□ -1.92
SMC4Q9NTJ3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 RNU6-116P-201ENST00000384042 109 ntBASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 RNU6-72P-201ENST00000384285 79 ntBASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 MIR10A-201ENST00000385043 110 ntBASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 RN7SKP284-201ENST00000411002 343 ntBASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 RPL21P90-201ENST00000415692 466 ntBASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 AL513328.1-201ENST00000446460 224 ntBASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 AC080013.2-201ENST00000460866 323 ntBASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 AP001324.2-201ENST00000461163 319 ntBASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 AL121769.1-201ENST00000469473 401 ntBASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 AC011005.2-201ENST00000487324 359 ntBASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 AC018437.1-201ENST00000492214 406 ntBASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 AC105417.1-201ENST00000514691 285 ntBASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 RNA5SP112-201ENST00000515937 99 ntBASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 RNU6-720P-201ENST00000516363 108 ntBASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 RPPH1-2P-201ENST00000516688 293 ntBASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 MIR4765-201ENST00000585007 77 ntBASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 AL670379.10-201ENST00000604330 253 ntBASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 AL670379.9-201ENST00000605428 253 ntBASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 AC087241.4-201ENST00000612441 480 ntBASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 AC104237.2-201ENST00000612456 443 ntBASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 CTSLP2-204ENST00000629029 392 ntBASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.04□□□□□ -1.92
SMC4Q9NTJ3 HAUS6P2-201ENST00000433254 2404 ntBASIC3.03□□□□□ -1.92
SMC4Q9NTJ3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.03□□□□□ -1.92
SMC4Q9NTJ3 RNU6-486P-201ENST00000363116 107 ntBASIC3.03□□□□□ -1.92
SMC4Q9NTJ3 RNU6-384P-201ENST00000364900 104 ntBASIC3.03□□□□□ -1.92
SMC4Q9NTJ3 RNU6-1158P-201ENST00000391167 107 ntBASIC3.03□□□□□ -1.92
SMC4Q9NTJ3 FABP5P14-201ENST00000437273 393 ntBASIC3.03□□□□□ -1.92
SMC4Q9NTJ3 EEF1B2P7-201ENST00000451177 676 ntBASIC3.03□□□□□ -1.92
SMC4Q9NTJ3 MRPL42P6-201ENST00000486397 371 ntBASIC3.03□□□□□ -1.92
SMC4Q9NTJ3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.03□□□□□ -1.92
SMC4Q9NTJ3 RPL22P13-201ENST00000493291 347 ntBASIC3.03□□□□□ -1.92
SMC4Q9NTJ3 RN7SL636P-201ENST00000497504 294 ntBASIC3.03□□□□□ -1.92
SMC4Q9NTJ3 MIR892C-201ENST00000516410 77 ntBASIC3.03□□□□□ -1.92
SMC4Q9NTJ3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms