Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TREX1Q9NSU2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.61□□□□□ -2.15
TREX1Q9NSU2 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
TREX1Q9NSU2 AC011494.1-201ENST00000596454 237 ntBASIC1.61□□□□□ -2.15
TREX1Q9NSU2 AC025811.1-201ENST00000604312 472 ntBASIC1.61□□□□□ -2.15
TREX1Q9NSU2 ELOCP5-201ENST00000604924 333 ntBASIC1.61□□□□□ -2.15
TREX1Q9NSU2 AC126118.1-201ENST00000607744 628 ntBASIC1.61□□□□□ -2.15
TREX1Q9NSU2 AP002782.1-201ENST00000623107 614 ntBASIC1.61□□□□□ -2.15
TREX1Q9NSU2 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
TREX1Q9NSU2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.61□□□□□ -2.15
TREX1Q9NSU2 RNA5SP363-201ENST00000365072 115 ntBASIC1.6□□□□□ -2.15
TREX1Q9NSU2 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
TREX1Q9NSU2 RNU1-57P-201ENST00000384491 166 ntBASIC1.6□□□□□ -2.15
TREX1Q9NSU2 SNORA8-201ENST00000384574 139 ntBASIC1.6□□□□□ -2.15
TREX1Q9NSU2 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TREX1Q9NSU2 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TREX1Q9NSU2 UBE2V1P10-201ENST00000414685 269 ntBASIC1.6□□□□□ -2.15
TREX1Q9NSU2 CYCSP49-201ENST00000420810 319 ntBASIC1.6□□□□□ -2.15
TREX1Q9NSU2 AL365338.1-201ENST00000422282 858 ntBASIC1.6□□□□□ -2.15
TREX1Q9NSU2 HSPE1P21-201ENST00000438283 308 ntBASIC1.6□□□□□ -2.15
TREX1Q9NSU2 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.6□□□□□ -2.15
TREX1Q9NSU2 AC027575.1-201ENST00000481064 460 ntBASIC1.6□□□□□ -2.15
TREX1Q9NSU2 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.6□□□□□ -2.15
TREX1Q9NSU2 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.6□□□□□ -2.15
TREX1Q9NSU2 RNU6-311P-201ENST00000516224 102 ntBASIC1.6□□□□□ -2.15
TREX1Q9NSU2 RNU2-53P-201ENST00000516257 147 ntBASIC1.6□□□□□ -2.15
TREX1Q9NSU2 RNU7-51P-201ENST00000516560 62 ntBASIC1.6□□□□□ -2.15
TREX1Q9NSU2 RNU6-586P-201ENST00000517265 104 ntBASIC1.6□□□□□ -2.15
TREX1Q9NSU2 AC034114.1-201ENST00000520293 285 ntBASIC1.6□□□□□ -2.15
TREX1Q9NSU2 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.6□□□□□ -2.15
TREX1Q9NSU2 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.6□□□□□ -2.15
TREX1Q9NSU2 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.6□□□□□ -2.15
TREX1Q9NSU2 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.6□□□□□ -2.15
TREX1Q9NSU2 GNAI2P1-201ENST00000541815 315 ntBASIC1.6□□□□□ -2.15
TREX1Q9NSU2 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.6□□□□□ -2.15
TREX1Q9NSU2 ZNF519P3-201ENST00000557158 1032 ntBASIC1.6□□□□□ -2.15
TREX1Q9NSU2 AC136619.2-201ENST00000563361 631 ntBASIC1.6□□□□□ -2.15
TREX1Q9NSU2 BNIP3P30-201ENST00000601184 574 ntBASIC1.6□□□□□ -2.15
TREX1Q9NSU2 AL078605.1-201ENST00000603529 500 ntBASIC1.6□□□□□ -2.15
TREX1Q9NSU2 MIR502-201ENST00000606349 86 ntBASIC1.6□□□□□ -2.15
TREX1Q9NSU2 AC091834.1-201ENST00000614543 472 ntBASIC1.6□□□□□ -2.15
TREX1Q9NSU2 AC090517.3-201ENST00000625170 141 ntBASIC1.6□□□□□ -2.15
TREX1Q9NSU2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
TREX1Q9NSU2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.6□□□□□ -2.15
TREX1Q9NSU2 SNORD115-3-201ENST00000363100 82 ntBASIC1.59□□□□□ -2.15
TREX1Q9NSU2 SNORA75B-201ENST00000384053 137 ntBASIC1.59□□□□□ -2.15
TREX1Q9NSU2 RNU6-533P-201ENST00000384144 107 ntBASIC1.59□□□□□ -2.15
TREX1Q9NSU2 Y_RNA.623-201ENST00000411128 95 ntBASIC1.59□□□□□ -2.15
TREX1Q9NSU2 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.59□□□□□ -2.15
TREX1Q9NSU2 BX510359.4-201ENST00000423750 193 ntBASIC1.59□□□□□ -2.15
TREX1Q9NSU2 AC008267.5-201ENST00000424928 265 ntBASIC1.59□□□□□ -2.15
TREX1Q9NSU2 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.59□□□□□ -2.15
TREX1Q9NSU2 KATNBL1P6-201ENST00000453433 915 ntBASIC1.59□□□□□ -2.15
TREX1Q9NSU2 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.59□□□□□ -2.15
TREX1Q9NSU2 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.59□□□□□ -2.15
TREX1Q9NSU2 AC018868.1-201ENST00000491307 315 ntBASIC1.59□□□□□ -2.15
TREX1Q9NSU2 AC112204.1-201ENST00000502591 103 ntBASIC1.59□□□□□ -2.15
TREX1Q9NSU2 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.59□□□□□ -2.15
TREX1Q9NSU2 AC116337.1-201ENST00000509680 687 ntBASIC1.59□□□□□ -2.15
TREX1Q9NSU2 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.59□□□□□ -2.15
TREX1Q9NSU2 AP005435.4-201ENST00000529514 284 ntBASIC1.59□□□□□ -2.15
TREX1Q9NSU2 DUXAP5-201ENST00000529668 529 ntBASIC1.59□□□□□ -2.15
TREX1Q9NSU2 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.59□□□□□ -2.15
TREX1Q9NSU2 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.59□□□□□ -2.15
TREX1Q9NSU2 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.59□□□□□ -2.15
TREX1Q9NSU2 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.59□□□□□ -2.15
TREX1Q9NSU2 AC015712.3-201ENST00000559380 164 ntBASIC1.59□□□□□ -2.15
TREX1Q9NSU2 MIR4285-201ENST00000581001 85 ntBASIC1.59□□□□□ -2.15
TREX1Q9NSU2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.59□□□□□ -2.15
TREX1Q9NSU2 AP000811.1-201ENST00000603803 651 ntBASIC1.59□□□□□ -2.15
TREX1Q9NSU2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.59□□□□□ -2.15
TREX1Q9NSU2 TUSC7.1-201ENST00000610969 165 ntBASIC1.59□□□□□ -2.15
TREX1Q9NSU2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.59□□□□□ -2.15
TREX1Q9NSU2 AL078595.3-201ENST00000623815 1166 ntBASIC1.59□□□□□ -2.15
TREX1Q9NSU2 MIR3529-201ENST00000637713 78 ntBASIC1.59□□□□□ -2.15
TREX1Q9NSU2 SNORD56.2-201ENST00000363242 71 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 MIR186-201ENST00000384988 86 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 RPS20P15-201ENST00000412792 311 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.58□□□□□ -2.16
TREX1Q9NSU2 AC119618.1-201ENST00000434191 222 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 AL606517.1-201ENST00000446914 387 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.58□□□□□ -2.16
TREX1Q9NSU2 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TREX1Q9NSU2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.58□□□□□ -2.16
TREX1Q9NSU2 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.58□□□□□ -2.16
TREX1Q9NSU2 BZW1P2-201ENST00000473537 826 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.58□□□□□ -2.16
TREX1Q9NSU2 AP000797.1-201ENST00000478870 387 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 HMGB1P30-201ENST00000492455 606 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.58□□□□□ -2.16
TREX1Q9NSU2 AC034244.1-201ENST00000507687 207 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 AC008834.1-201ENST00000511612 175 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.58□□□□□ -2.16
TREX1Q9NSU2 RNU6-970P-201ENST00000516312 107 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 RNA5SP337-201ENST00000517007 109 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 MTND2P7-201ENST00000521337 640 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.58□□□□□ -2.16
TREX1Q9NSU2 AP003122.4-201ENST00000530980 758 ntBASIC1.58□□□□□ -2.16
TREX1Q9NSU2 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms