Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.35□□□□□ -1.87
VPS45Q9NRW7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS45Q9NRW7 LRRC37A5P-203ENST00000580181 585 ntBASIC3.35□□□□□ -1.87
VPS45Q9NRW7 AC023043.2-201ENST00000589678 1026 ntBASIC3.35□□□□□ -1.87
VPS45Q9NRW7 AC073657.2-201ENST00000605661 303 ntBASIC3.35□□□□□ -1.87
VPS45Q9NRW7 AL031601.2-202ENST00000622650 282 ntBASIC3.35□□□□□ -1.87
VPS45Q9NRW7 AC110079.1-202ENST00000635213 138 ntBASIC3.35□□□□□ -1.87
VPS45Q9NRW7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS45Q9NRW7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS45Q9NRW7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS45Q9NRW7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS45Q9NRW7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS45Q9NRW7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
VPS45Q9NRW7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS45Q9NRW7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
VPS45Q9NRW7 RNU1-70P-201ENST00000362618 164 ntBASIC3.34□□□□□ -1.87
VPS45Q9NRW7 RNU6-266P-201ENST00000364225 107 ntBASIC3.34□□□□□ -1.87
VPS45Q9NRW7 Y_RNA.384-201ENST00000383909 102 ntBASIC3.34□□□□□ -1.87
VPS45Q9NRW7 RNU6-1179P-201ENST00000384667 107 ntBASIC3.34□□□□□ -1.87
VPS45Q9NRW7 MIR767-201ENST00000390228 109 ntBASIC3.34□□□□□ -1.87
VPS45Q9NRW7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.34□□□□□ -1.87
VPS45Q9NRW7 AL353729.1-201ENST00000425044 720 ntBASIC3.34□□□□□ -1.87
VPS45Q9NRW7 MYL8P-204ENST00000431574 518 ntBASIC3.34□□□□□ -1.87
VPS45Q9NRW7 AC009969.1-201ENST00000438726 172 ntBASIC3.34□□□□□ -1.87
VPS45Q9NRW7 AC107083.1-201ENST00000439643 279 ntBASIC3.34□□□□□ -1.87
VPS45Q9NRW7 NDUFB1P2-201ENST00000449477 176 ntBASIC3.34□□□□□ -1.87
VPS45Q9NRW7 AC117503.1-201ENST00000472241 394 ntBASIC3.34□□□□□ -1.87
VPS45Q9NRW7 Y_RNA.682-201ENST00000516457 100 ntBASIC3.34□□□□□ -1.87
VPS45Q9NRW7 RNU6-273P-201ENST00000516937 96 ntBASIC3.34□□□□□ -1.87
VPS45Q9NRW7 AC069113.1-201ENST00000517763 267 ntBASIC3.34□□□□□ -1.87
VPS45Q9NRW7 AC009902.1-201ENST00000519351 183 ntBASIC3.34□□□□□ -1.87
VPS45Q9NRW7 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS45Q9NRW7 AP002404.1-201ENST00000532005 451 ntBASIC3.34□□□□□ -1.87
VPS45Q9NRW7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.34□□□□□ -1.87
VPS45Q9NRW7 H3F3AP1-201ENST00000559984 334 ntBASIC3.34□□□□□ -1.87
VPS45Q9NRW7 HMGN2P15-201ENST00000585707 270 ntBASIC3.34□□□□□ -1.87
VPS45Q9NRW7 AC113139.1-201ENST00000605049 239 ntBASIC3.34□□□□□ -1.87
VPS45Q9NRW7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS45Q9NRW7 AL157817.1-201ENST00000614264 790 ntBASIC3.34□□□□□ -1.87
VPS45Q9NRW7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
VPS45Q9NRW7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.34□□□□□ -1.88
VPS45Q9NRW7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
VPS45Q9NRW7 SNORD56.3-201ENST00000363507 71 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 RNU6-1303P-201ENST00000364841 107 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS45Q9NRW7 RNU6-128P-201ENST00000383976 107 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 SNORA44-201ENST00000384584 132 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 RNA5SP354-201ENST00000391247 136 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 SNORA40C-201ENST00000391285 128 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 RNA5SP229-201ENST00000410809 99 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 ATG3P1-201ENST00000419507 911 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 AL139396.1-201ENST00000421137 167 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 AL358075.3-201ENST00000426289 226 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 RPS15AP5-201ENST00000436276 388 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 CST9LP2-201ENST00000437612 320 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS45Q9NRW7 AC233279.1-201ENST00000455300 423 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 RPS29P12-201ENST00000460178 152 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 AC087884.1-201ENST00000469738 328 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.33□□□□□ -1.88
VPS45Q9NRW7 RPL39P5-202ENST00000512505 151 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS45Q9NRW7 SNORA25.17-201ENST00000517184 124 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 RNA5SP454-201ENST00000517231 127 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 AC087854.1-201ENST00000519706 414 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 RNU6-323P-201ENST00000521915 107 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.33□□□□□ -1.88
VPS45Q9NRW7 MIR4672-201ENST00000583126 81 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 AC002044.1-201ENST00000606707 158 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 AL138726.1-201ENST00000614873 333 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 FAM157A-202ENST00000615155 405 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 AL137790.1-201ENST00000634283 177 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS45Q9NRW7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.33□□□□□ -1.88
VPS45Q9NRW7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS45Q9NRW7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS45Q9NRW7 AC006026.1-201ENST00000444025 1803 ntBASIC3.33□□□□□ -1.88
VPS45Q9NRW7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
VPS45Q9NRW7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.32□□□□□ -1.88
VPS45Q9NRW7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.32□□□□□ -1.88
VPS45Q9NRW7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
VPS45Q9NRW7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VPS45Q9NRW7 MIR412-201ENST00000362142 91 ntBASIC3.32□□□□□ -1.88
VPS45Q9NRW7 SNORD116-11-201ENST00000383882 92 ntBASIC3.32□□□□□ -1.88
VPS45Q9NRW7 Y_RNA.387-201ENST00000383918 102 ntBASIC3.32□□□□□ -1.88
VPS45Q9NRW7 Y_RNA.460-201ENST00000384255 102 ntBASIC3.32□□□□□ -1.88
VPS45Q9NRW7 MIR548K-201ENST00000408406 116 ntBASIC3.32□□□□□ -1.88
VPS45Q9NRW7 AC074085.1-201ENST00000413598 418 ntBASIC3.32□□□□□ -1.88
VPS45Q9NRW7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.32□□□□□ -1.88
VPS45Q9NRW7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.32□□□□□ -1.88
VPS45Q9NRW7 SNAP23P1-201ENST00000433229 246 ntBASIC3.32□□□□□ -1.88
VPS45Q9NRW7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.32□□□□□ -1.88
VPS45Q9NRW7 RPL32P28-201ENST00000443577 397 ntBASIC3.32□□□□□ -1.88
VPS45Q9NRW7 HMGN2P10-201ENST00000448085 265 ntBASIC3.32□□□□□ -1.88
VPS45Q9NRW7 AC107399.1-201ENST00000451226 265 ntBASIC3.32□□□□□ -1.88
VPS45Q9NRW7 RPS27P26-201ENST00000494583 239 ntBASIC3.32□□□□□ -1.88
VPS45Q9NRW7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.32□□□□□ -1.88
VPS45Q9NRW7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.32□□□□□ -1.88
VPS45Q9NRW7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms