Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RPL21P111-201ENST00000418453 477 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 AL591704.2-201ENST00000421658 181 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 CST2P1-201ENST00000425770 87 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 AC099677.2-201ENST00000436385 175 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 USP9YP17-201ENST00000444617 696 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 RPL7P36-201ENST00000444633 681 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 RPS27AP8-201ENST00000452665 445 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 AL122001.1-201ENST00000457027 370 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 AMD1P1-201ENST00000457220 922 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 RPL9P9-202ENST00000466501 579 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 UBL5P1-201ENST00000507979 193 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 AC116353.3-201ENST00000511215 249 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 RNU5F-2P-201ENST00000516066 82 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 SNORD116-28-201ENST00000516123 91 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 RNA5SP490-201ENST00000517141 136 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 AC019176.1-201ENST00000518519 225 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 AC018889.1-201ENST00000605372 397 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 AP000654.2-201ENST00000605633 586 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 MIR502-201ENST00000606349 86 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 RNU6-88P-201ENST00000606801 100 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 AC004492.1-201ENST00000607036 742 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 AC072039.2-201ENST00000608883 439 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 AC131159.1-201ENST00000621854 213 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 AC025034.2-201ENST00000623264 286 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 AC100821.1-201ENST00000523153 2479 ntBASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.62□□□□□ -2.31
CDC42SE1Q9NRR8 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 RNU4-15P-201ENST00000362613 141 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 Y_RNA.46-201ENST00000362695 102 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 SNORD33-201ENST00000362761 85 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 SNORD56.1-201ENST00000362913 68 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 RNU1-124P-201ENST00000363861 145 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 Y_RNA.255-201ENST00000364581 97 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 RNU6-1222P-201ENST00000384615 107 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 MIR517C-201ENST00000385103 95 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 MIR513A1-201ENST00000385138 129 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 MRPL35P1-201ENST00000404272 572 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 AL136310.1-201ENST00000404926 654 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 RN7SKP192-201ENST00000411291 327 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 AC123900.1-201ENST00000420390 96 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 MTND5P25-201ENST00000430499 799 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 AL445646.1-201ENST00000431784 216 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 HMGB1P31-201ENST00000437242 427 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 PRPS1P1-201ENST00000445305 876 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 FTH1P25-201ENST00000447665 469 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 AC134050.1-201ENST00000495088 933 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 HMGN1P13-201ENST00000505795 138 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 MIR449C-201ENST00000516047 92 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 AC013828.2-201ENST00000532487 235 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 VN1R90P-201ENST00000595717 726 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 AL391001.1-201ENST00000602747 715 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 AL353778.1-201ENST00000603149 408 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 AC084824.5-201ENST00000612009 413 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 AC012676.2-201ENST00000619258 186 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 FRG1KP-201ENST00000623592 341 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 AL356596.1-201ENST00000624230 379 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 AC009033.1-201ENST00000624279 431 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 OR4G3P-201ENST00000633500 913 ntBASIC0.61□□□□□ -2.31
CDC42SE1Q9NRR8 ZNF355P-201ENST00000427301 3216 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 MTND4P23-201ENST00000447723 1363 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 AC006026.1-201ENST00000444025 1803 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 RNU1-22P-201ENST00000363334 158 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 RNU6-1285P-201ENST00000363480 105 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 SNORD116-12-201ENST00000384468 92 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 MIR578-201ENST00000384828 96 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 RPS3AP36-201ENST00000398190 775 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 RNU2-62P-201ENST00000410868 191 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 RPL22P18-201ENST00000417197 377 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 BTF3P4-201ENST00000418852 495 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 AL365400.1-201ENST00000431854 640 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 RPL23AP30-201ENST00000432419 501 ntBASIC0.6□□□□□ -2.31
CDC42SE1Q9NRR8 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms