Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AC112771.1-201ENST00000463581 102 ntBASIC2.57□□□□□ -2
CHMP1AQ9HD42 RPL36AP48-201ENST00000485521 314 ntBASIC2.57□□□□□ -2
CHMP1AQ9HD42 AC069439.1-201ENST00000494739 167 ntBASIC2.57□□□□□ -2
CHMP1AQ9HD42 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.57□□□□□ -2
CHMP1AQ9HD42 AC090136.1-201ENST00000520009 240 ntBASIC2.57□□□□□ -2
CHMP1AQ9HD42 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.57□□□□□ -2
CHMP1AQ9HD42 COPS8P3-201ENST00000526024 482 ntBASIC2.57□□□□□ -2
CHMP1AQ9HD42 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.57□□□□□ -2
CHMP1AQ9HD42 AC079598.5-201ENST00000547460 117 ntBASIC2.57□□□□□ -2
CHMP1AQ9HD42 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.57□□□□□ -2
CHMP1AQ9HD42 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.57□□□□□ -2
CHMP1AQ9HD42 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.57□□□□□ -2
CHMP1AQ9HD42 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.57□□□□□ -2
CHMP1AQ9HD42 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.57□□□□□ -2
CHMP1AQ9HD42 RPS15AP11-201ENST00000594193 385 ntBASIC2.57□□□□□ -2
CHMP1AQ9HD42 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.57□□□□□ -2
CHMP1AQ9HD42 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.57□□□□□ -2
CHMP1AQ9HD42 AC097372.5-201ENST00000623665 376 ntBASIC2.57□□□□□ -2
CHMP1AQ9HD42 AL160394.1-201ENST00000624765 724 ntBASIC2.57□□□□□ -2
CHMP1AQ9HD42 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.57□□□□□ -2
CHMP1AQ9HD42 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CHMP1AQ9HD42 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.56□□□□□ -2
CHMP1AQ9HD42 RNU6-105P-201ENST00000363909 104 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 MIR218-1-201ENST00000384999 110 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 SNORD73A-201ENST00000386062 65 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 U3.19-201ENST00000390893 196 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 EIF4E2P1-201ENST00000393781 255 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 AL451074.5-201ENST00000415894 435 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.56□□□□□ -2
CHMP1AQ9HD42 RPL30P4-201ENST00000429309 333 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 AC092427.1-202ENST00000430569 476 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 AC007969.2-201ENST00000441891 191 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.56□□□□□ -2
CHMP1AQ9HD42 VN1R34P-201ENST00000447387 883 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 RN7SL293P-201ENST00000481765 281 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.56□□□□□ -2
CHMP1AQ9HD42 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.56□□□□□ -2
CHMP1AQ9HD42 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.56□□□□□ -2
CHMP1AQ9HD42 RNU6-377P-201ENST00000515965 102 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 SNORA19.2-201ENST00000516013 114 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 RNU6-323P-201ENST00000521915 107 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.56□□□□□ -2
CHMP1AQ9HD42 AP005597.4-201ENST00000526762 229 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.56□□□□□ -2
CHMP1AQ9HD42 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.56□□□□□ -2
CHMP1AQ9HD42 MIR3199-1-201ENST00000582434 88 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.56□□□□□ -2
CHMP1AQ9HD42 MIR3117-201ENST00000584034 78 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.56□□□□□ -2
CHMP1AQ9HD42 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.56□□□□□ -2
CHMP1AQ9HD42 AC012493.2-201ENST00000595083 291 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 AL357078.3-201ENST00000607528 618 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 AC069200.1-201ENST00000609511 323 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 AC010297.1-201ENST00000623948 149 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 AC090617.10-201ENST00000624308 134 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 MTND5P30-201ENST00000452896 1731 ntBASIC2.56□□□□□ -2
CHMP1AQ9HD42 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.56□□□□□ -2
CHMP1AQ9HD42 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.56□□□□□ -2
CHMP1AQ9HD42 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.55□□□□□ -2
CHMP1AQ9HD42 RNU6-336P-201ENST00000364891 107 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 RNU6-827P-201ENST00000365553 106 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 RNU6-373P-201ENST00000411247 98 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.55□□□□□ -2
CHMP1AQ9HD42 AC097463.2-201ENST00000421074 142 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.55□□□□□ -2
CHMP1AQ9HD42 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.55□□□□□ -2
CHMP1AQ9HD42 Z75746.1-201ENST00000440243 2080 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.55□□□□□ -2
CHMP1AQ9HD42 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.55□□□□□ -2
CHMP1AQ9HD42 NFU1P2-201ENST00000448700 469 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 AL031274.1-201ENST00000450334 232 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 snoU13.22-201ENST00000459428 104 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 AC133134.1-201ENST00000466800 359 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 AC109925.1-201ENST00000478069 331 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 RPL23AP49-201ENST00000492925 468 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 SCARNA3-201ENST00000517097 143 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 AC109479.2-201ENST00000517842 174 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.55□□□□□ -2
CHMP1AQ9HD42 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.55□□□□□ -2
CHMP1AQ9HD42 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.55□□□□□ -2
CHMP1AQ9HD42 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.55□□□□□ -2
CHMP1AQ9HD42 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.55□□□□□ -2
CHMP1AQ9HD42 AL133241.1-201ENST00000556832 487 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.55□□□□□ -2
CHMP1AQ9HD42 SNORA59B-202ENST00000578183 701 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 AC090897.2-201ENST00000581715 130 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.55□□□□□ -2
CHMP1AQ9HD42 RPL12P50-201ENST00000603116 116 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 AL020991.1-201ENST00000612314 373 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 FAM157A-202ENST00000615155 405 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 AC024581.2-201ENST00000619986 252 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 AC244517.12-201ENST00000623581 663 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 AC080100.1-201ENST00000624239 5356 ntBASIC2.55□□□□□ -2
CHMP1AQ9HD42 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
CHMP1AQ9HD42 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
CHMP1AQ9HD42 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CHMP1AQ9HD42 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.54□□□□□ -2
CHMP1AQ9HD42 RNA5SP393-201ENST00000363423 117 ntBASIC2.54□□□□□ -2
CHMP1AQ9HD42 RNU6-527P-201ENST00000363425 104 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms