Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL138880.2-201ENST00000616214 239 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 AC073308.1-201ENST00000623696 305 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.87□□□□□ -1.95
PCDH9Q9HC56 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.87□□□□□ -1.95
PCDH9Q9HC56 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
PCDH9Q9HC56 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.87□□□□□ -1.95
PCDH9Q9HC56 AL359693.1-201ENST00000614959 2407 ntBASIC2.87□□□□□ -1.95
PCDH9Q9HC56 Y_RNA.142-201ENST00000363491 102 ntBASIC2.86□□□□□ -1.95
PCDH9Q9HC56 SNORD81.2-201ENST00000365153 76 ntBASIC2.86□□□□□ -1.95
PCDH9Q9HC56 Y_RNA.356-201ENST00000365475 113 ntBASIC2.86□□□□□ -1.95
PCDH9Q9HC56 Y_RNA.414-201ENST00000384011 101 ntBASIC2.86□□□□□ -1.95
PCDH9Q9HC56 RNU6-1035P-201ENST00000384477 107 ntBASIC2.86□□□□□ -1.95
PCDH9Q9HC56 RNU6-658P-201ENST00000384606 106 ntBASIC2.86□□□□□ -1.95
PCDH9Q9HC56 USP9YP20-201ENST00000419224 558 ntBASIC2.86□□□□□ -1.95
PCDH9Q9HC56 PDCL2P1-201ENST00000419302 352 ntBASIC2.86□□□□□ -1.95
PCDH9Q9HC56 HMGN2P30-201ENST00000423237 256 ntBASIC2.86□□□□□ -1.95
PCDH9Q9HC56 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.86□□□□□ -1.95
PCDH9Q9HC56 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.86□□□□□ -1.95
PCDH9Q9HC56 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.86□□□□□ -1.95
PCDH9Q9HC56 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.86□□□□□ -1.95
PCDH9Q9HC56 AC117503.1-201ENST00000472241 394 ntBASIC2.86□□□□□ -1.95
PCDH9Q9HC56 RPS29P20-201ENST00000489592 171 ntBASIC2.86□□□□□ -1.95
PCDH9Q9HC56 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.86□□□□□ -1.95
PCDH9Q9HC56 AC008549.1-201ENST00000512900 643 ntBASIC2.86□□□□□ -1.95
PCDH9Q9HC56 AC091826.1-201ENST00000514065 313 ntBASIC2.86□□□□□ -1.95
PCDH9Q9HC56 SNORA14.1-201ENST00000516113 141 ntBASIC2.86□□□□□ -1.95
PCDH9Q9HC56 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.86□□□□□ -1.95
PCDH9Q9HC56 RNU6-323P-201ENST00000521915 107 ntBASIC2.86□□□□□ -1.95
PCDH9Q9HC56 HSPE1P20-201ENST00000538133 289 ntBASIC2.86□□□□□ -1.95
PCDH9Q9HC56 MIR4742-201ENST00000581069 85 ntBASIC2.86□□□□□ -1.95
PCDH9Q9HC56 MIR3941-201ENST00000582572 103 ntBASIC2.86□□□□□ -1.95
PCDH9Q9HC56 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.86□□□□□ -1.95
PCDH9Q9HC56 AC243960.4-201ENST00000600532 288 ntBASIC2.86□□□□□ -1.95
PCDH9Q9HC56 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PCDH9Q9HC56 AC135507.2-201ENST00000612443 309 ntBASIC2.86□□□□□ -1.95
PCDH9Q9HC56 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.86□□□□□ -1.95
PCDH9Q9HC56 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.86□□□□□ -1.95
PCDH9Q9HC56 AC002064.3-201ENST00000623448 346 ntBASIC2.86□□□□□ -1.95
PCDH9Q9HC56 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
PCDH9Q9HC56 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PCDH9Q9HC56 AC138393.1-203ENST00000327086 343 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PCDH9Q9HC56 SNORD113-7-201ENST00000363762 77 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 RNU6-266P-201ENST00000364225 107 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 MIR450B-201ENST00000401182 78 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 AL122016.1-201ENST00000403365 367 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 RPL19P1-201ENST00000411635 428 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 AC096664.2-201ENST00000411843 406 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 MTND3P8-201ENST00000412909 339 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 AL592148.1-201ENST00000413568 445 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDH9Q9HC56 MTCO3P46-201ENST00000425787 232 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 NDUFA5P4-201ENST00000436704 385 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDH9Q9HC56 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.85□□□□□ -1.95
PCDH9Q9HC56 RNU6-329P-201ENST00000459618 107 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 RPL7P43-201ENST00000478876 753 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 HMGB1P30-201ENST00000492455 606 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.85□□□□□ -1.95
PCDH9Q9HC56 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDH9Q9HC56 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDH9Q9HC56 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PCDH9Q9HC56 ELOCP31-201ENST00000540463 467 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 HMGB1P14-201ENST00000557424 591 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.85□□□□□ -1.95
PCDH9Q9HC56 MIR3942-201ENST00000585264 109 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 AC007938.3-201ENST00000604965 623 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 AL627309.6-201ENST00000606857 840 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.85□□□□□ -1.95
PCDH9Q9HC56 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PCDH9Q9HC56 AC121333.1-201ENST00000567488 2709 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 AC138915.1-201ENST00000565427 1685 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 MAPK10-266ENST00000641066 6555 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 AL161431.1-201ENST00000618966 4205 ntBASIC2.85□□□□□ -1.95
PCDH9Q9HC56 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
PCDH9Q9HC56 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
PCDH9Q9HC56 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDH9Q9HC56 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
PCDH9Q9HC56 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 MIR412-201ENST00000362142 91 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 RNU6-254P-201ENST00000363377 107 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 U3.12-201ENST00000364498 214 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 SNORA18.3-201ENST00000384122 132 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 MIR10A-201ENST00000385043 110 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 FO393413.1-201ENST00000402892 195 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 RN7SKP32-201ENST00000410167 303 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 Y_RNA.623-201ENST00000411128 95 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 RNU6-607P-201ENST00000411283 108 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 RNA5SP492-201ENST00000411330 114 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 CYCSP33-201ENST00000414485 327 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.84□□□□□ -1.95
PCDH9Q9HC56 AL353621.1-201ENST00000418219 243 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 AL353729.1-201ENST00000425044 720 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 MYL8P-204ENST00000431574 518 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 AL365400.1-201ENST00000431854 640 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.84□□□□□ -1.95
PCDH9Q9HC56 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.84□□□□□ -1.95
PCDH9Q9HC56 MTND4LP16-201ENST00000440828 295 ntBASIC2.84□□□□□ -1.95
PCDH9Q9HC56 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDH9Q9HC56 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms