Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 U3.37-201ENST00000408528 213 ntBASIC2.54□□□□□ -2
SNX25Q9H3E2 RNU2-29P-201ENST00000410423 189 ntBASIC2.54□□□□□ -2
SNX25Q9H3E2 UBE2V1P10-201ENST00000414685 269 ntBASIC2.54□□□□□ -2
SNX25Q9H3E2 MTCO3P41-201ENST00000414801 328 ntBASIC2.54□□□□□ -2
SNX25Q9H3E2 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.54□□□□□ -2
SNX25Q9H3E2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.54□□□□□ -2
SNX25Q9H3E2 CR769767.1-201ENST00000436337 346 ntBASIC2.54□□□□□ -2
SNX25Q9H3E2 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.54□□□□□ -2
SNX25Q9H3E2 HIGD1AP2-201ENST00000446367 280 ntBASIC2.54□□□□□ -2
SNX25Q9H3E2 MTCO2P7-201ENST00000446518 666 ntBASIC2.54□□□□□ -2
SNX25Q9H3E2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.54□□□□□ -2
SNX25Q9H3E2 AC133134.1-201ENST00000466800 359 ntBASIC2.54□□□□□ -2
SNX25Q9H3E2 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.54□□□□□ -2
SNX25Q9H3E2 RPL9P6-201ENST00000492764 598 ntBASIC2.54□□□□□ -2
SNX25Q9H3E2 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.54□□□□□ -2
SNX25Q9H3E2 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.54□□□□□ -2
SNX25Q9H3E2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.54□□□□□ -2
SNX25Q9H3E2 AC008413.1-201ENST00000511864 177 ntBASIC2.54□□□□□ -2
SNX25Q9H3E2 RNU6-1178P-201ENST00000516674 107 ntBASIC2.54□□□□□ -2
SNX25Q9H3E2 BTF3P12-201ENST00000519620 469 ntBASIC2.54□□□□□ -2
SNX25Q9H3E2 OR5AQ1P-201ENST00000527596 927 ntBASIC2.54□□□□□ -2
SNX25Q9H3E2 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.54□□□□□ -2
SNX25Q9H3E2 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.54□□□□□ -2
SNX25Q9H3E2 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.54□□□□□ -2
SNX25Q9H3E2 AC103810.6-201ENST00000606708 136 ntBASIC2.54□□□□□ -2
SNX25Q9H3E2 AC064807.4-201ENST00000607201 407 ntBASIC2.54□□□□□ -2
SNX25Q9H3E2 AC046143.2-201ENST00000609789 160 ntBASIC2.54□□□□□ -2
SNX25Q9H3E2 AC011890.2-201ENST00000613393 294 ntBASIC2.54□□□□□ -2
SNX25Q9H3E2 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.54□□□□□ -2
SNX25Q9H3E2 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.54□□□□□ -2
SNX25Q9H3E2 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.54□□□□□ -2
SNX25Q9H3E2 AC124864.2-201ENST00000624736 186 ntBASIC2.54□□□□□ -2
SNX25Q9H3E2 OR5AK4P-201ENST00000635912 903 ntBASIC2.54□□□□□ -2
SNX25Q9H3E2 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
SNX25Q9H3E2 AC016717.2-201ENST00000609089 5141 ntBASIC2.54□□□□□ -2
SNX25Q9H3E2 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SNX25Q9H3E2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.53□□□□□ -2
SNX25Q9H3E2 AC135776.4-201ENST00000624300 1904 ntBASIC2.53□□□□□ -2
SNX25Q9H3E2 RNU6-623P-201ENST00000363143 105 ntBASIC2.53□□□□□ -2
SNX25Q9H3E2 XGY1-201ENST00000381172 446 ntBASIC2.53□□□□□ -2
SNX25Q9H3E2 RNU6-1127P-201ENST00000384580 107 ntBASIC2.53□□□□□ -2
SNX25Q9H3E2 MORF4L1P6-201ENST00000418771 268 ntBASIC2.53□□□□□ -2
SNX25Q9H3E2 MTCYBP8-201ENST00000422855 651 ntBASIC2.53□□□□□ -2
SNX25Q9H3E2 MICF-203ENST00000432679 129 ntBASIC2.53□□□□□ -2
SNX25Q9H3E2 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.53□□□□□ -2
SNX25Q9H3E2 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.53□□□□□ -2
SNX25Q9H3E2 AC073415.1-201ENST00000449240 153 ntBASIC2.53□□□□□ -2
SNX25Q9H3E2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.53□□□□□ -2
SNX25Q9H3E2 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.53□□□□□ -2
SNX25Q9H3E2 AC107401.1-201ENST00000503426 685 ntBASIC2.53□□□□□ -2
SNX25Q9H3E2 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.53□□□□□ -2
SNX25Q9H3E2 AP003034.1-201ENST00000534621 422 ntBASIC2.53□□□□□ -2
SNX25Q9H3E2 AP002770.2-201ENST00000543613 532 ntBASIC2.53□□□□□ -2
SNX25Q9H3E2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.53□□□□□ -2
SNX25Q9H3E2 LRRC37A5P-203ENST00000580181 585 ntBASIC2.53□□□□□ -2
SNX25Q9H3E2 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.53□□□□□ -2
SNX25Q9H3E2 BNIP3P30-201ENST00000601184 574 ntBASIC2.53□□□□□ -2
SNX25Q9H3E2 AC078795.2-201ENST00000602835 1252 ntBASIC2.53□□□□□ -2
SNX25Q9H3E2 AP001330.5-201ENST00000607176 411 ntBASIC2.53□□□□□ -2
SNX25Q9H3E2 uc_338.14-201ENST00000613162 166 ntBASIC2.53□□□□□ -2
SNX25Q9H3E2 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.53□□□□□ -2
SNX25Q9H3E2 AL158209.2-201ENST00000619266 216 ntBASIC2.53□□□□□ -2
SNX25Q9H3E2 AC138627.2-201ENST00000624202 601 ntBASIC2.53□□□□□ -2
SNX25Q9H3E2 MIR6863-201ENST00000636112 90 ntBASIC2.53□□□□□ -2
SNX25Q9H3E2 AC006020.1-201ENST00000420179 1854 ntBASIC2.53□□□□□ -2
SNX25Q9H3E2 AC080128.1-201ENST00000474389 1917 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SNX25Q9H3E2 AC010329.5-201ENST00000623497 2174 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 RNU6-552P-201ENST00000362869 119 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 Y_RNA.409-201ENST00000383990 98 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 RNU6-1083P-201ENST00000384022 107 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 Y_RNA.517-201ENST00000384551 106 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 RNU6-748P-201ENST00000384648 107 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 SNORD116-4-201ENST00000384733 96 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 MIR147B-201ENST00000390185 80 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 RPS4XP7-201ENST00000406274 780 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.52□□□□□ -2.01
SNX25Q9H3E2 PGBD4P6-201ENST00000421501 610 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 AC092427.1-202ENST00000430569 476 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 AL606489.2-201ENST00000433886 234 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX25Q9H3E2 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX25Q9H3E2 FDX1P2-201ENST00000450769 375 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 RNU7-63P-201ENST00000459054 62 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 AP001324.2-201ENST00000461163 319 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 RPL7P43-201ENST00000478876 753 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 MRPL42P6-201ENST00000486397 371 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 MIR892C-201ENST00000516410 77 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX25Q9H3E2 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX25Q9H3E2 COX6CP5-201ENST00000527162 228 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.52□□□□□ -2.01
SNX25Q9H3E2 MIR5194-201ENST00000582634 120 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
SNX25Q9H3E2 AC067747.1-201ENST00000608026 250 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
SNX25Q9H3E2 AC139792.3-201ENST00000623525 224 ntBASIC2.52□□□□□ -2.01
SNX25Q9H3E2 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SNX25Q9H3E2 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.52□□□□□ -2.01
SNX25Q9H3E2 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms