Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.42□□□□□ -2.02
UBQLN3Q9H347 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
UBQLN3Q9H347 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.42□□□□□ -2.02
UBQLN3Q9H347 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
UBQLN3Q9H347 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.41□□□□□ -2.02
UBQLN3Q9H347 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
UBQLN3Q9H347 AC138393.1-203ENST00000327086 343 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 RNU6-486P-201ENST00000363116 107 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 RNU6-434P-201ENST00000384376 107 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 RNU6-1127P-201ENST00000384580 107 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 SNORD37.1-201ENST00000390968 65 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 MTCO3P40-201ENST00000392516 676 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 RAP1BP3-201ENST00000407180 549 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 BX276092.3-201ENST00000424182 230 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.41□□□□□ -2.02
UBQLN3Q9H347 ARL5AP4-201ENST00000430731 512 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.41□□□□□ -2.02
UBQLN3Q9H347 VN1R108P-201ENST00000431580 830 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 HMGB1P31-201ENST00000437242 427 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 RPL7P54-201ENST00000438336 674 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 PRPS1P1-201ENST00000445305 876 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.41□□□□□ -2.02
UBQLN3Q9H347 AC073415.1-201ENST00000449240 153 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.41□□□□□ -2.02
UBQLN3Q9H347 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.41□□□□□ -2.02
UBQLN3Q9H347 CACYBPP2-201ENST00000453625 678 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.41□□□□□ -2.02
UBQLN3Q9H347 MED28P2-201ENST00000475771 317 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 RPL22P13-201ENST00000493291 347 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.41□□□□□ -2.02
UBQLN3Q9H347 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.41□□□□□ -2.02
UBQLN3Q9H347 TBCAP3-201ENST00000512475 312 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 AC096725.1-201ENST00000514266 313 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.41□□□□□ -2.02
UBQLN3Q9H347 SNORA31.15-201ENST00000516771 132 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.41□□□□□ -2.02
UBQLN3Q9H347 AP003034.1-201ENST00000534621 422 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 HIF1AP1-201ENST00000553642 175 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.41□□□□□ -2.02
UBQLN3Q9H347 MIR4635-201ENST00000583759 79 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.41□□□□□ -2.02
UBQLN3Q9H347 AL356575.1-201ENST00000603008 283 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 AC017083.3-201ENST00000609955 700 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 HULC.1-201ENST00000612720 240 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 RMST_4.1-201ENST00000616886 107 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 SCARNA4-202ENST00000625402 129 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.41□□□□□ -2.02
UBQLN3Q9H347 AC006020.1-201ENST00000420179 1854 ntBASIC2.41□□□□□ -2.02
UBQLN3Q9H347 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.02
UBQLN3Q9H347 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
UBQLN3Q9H347 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
UBQLN3Q9H347 RNU6-942P-201ENST00000363002 107 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 Y_RNA.255-201ENST00000364581 97 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
UBQLN3Q9H347 SNORD116-20-201ENST00000384529 92 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 RNA5SP210-201ENST00000391034 120 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 RNU2-3P-201ENST00000410144 191 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 CYCSP33-201ENST00000414485 327 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 AL365400.1-201ENST00000431854 640 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.4□□□□□ -2.03
UBQLN3Q9H347 RPS3P1-201ENST00000456781 192 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.4□□□□□ -2.03
UBQLN3Q9H347 AC112771.1-201ENST00000463581 102 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.4□□□□□ -2.03
UBQLN3Q9H347 RPL37P25-201ENST00000507308 276 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.4□□□□□ -2.03
UBQLN3Q9H347 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.4□□□□□ -2.03
UBQLN3Q9H347 RNU4-29P-201ENST00000515943 174 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 RNU2-69P-201ENST00000516061 100 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 AL137161.1-201ENST00000532231 390 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.4□□□□□ -2.03
UBQLN3Q9H347 MIR5571-201ENST00000577998 113 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 LRRC37A5P-203ENST00000580181 585 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 MIR5583-1-201ENST00000580941 59 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 AC105245.1-201ENST00000581934 244 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 AC078795.2-201ENST00000602835 1252 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 AC068792.1-201ENST00000621354 417 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.4□□□□□ -2.03
UBQLN3Q9H347 AC022418.1-201ENST00000624118 445 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 AC138627.2-201ENST00000624202 601 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.4□□□□□ -2.03
UBQLN3Q9H347 AL136360.1-201ENST00000503377 1900 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 Z75746.1-201ENST00000440243 2080 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.4□□□□□ -2.03
UBQLN3Q9H347 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
UBQLN3Q9H347 AL139276.1-201ENST00000311910 1001 ntBASIC2.39□□□□□ -2.03
UBQLN3Q9H347 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
UBQLN3Q9H347 RNU6-1085P-201ENST00000363576 107 ntBASIC2.39□□□□□ -2.03
UBQLN3Q9H347 SNORA25.6-201ENST00000364121 118 ntBASIC2.39□□□□□ -2.03
UBQLN3Q9H347 Y_RNA.324-201ENST00000365165 102 ntBASIC2.39□□□□□ -2.03
UBQLN3Q9H347 MIR196B-201ENST00000384852 84 ntBASIC2.39□□□□□ -2.03
UBQLN3Q9H347 SNORA16.2-201ENST00000390991 127 ntBASIC2.39□□□□□ -2.03
UBQLN3Q9H347 AL606923.1-201ENST00000406616 190 ntBASIC2.39□□□□□ -2.03
UBQLN3Q9H347 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.39□□□□□ -2.03
UBQLN3Q9H347 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.39□□□□□ -2.03
UBQLN3Q9H347 AC138623.1-201ENST00000418060 216 ntBASIC2.39□□□□□ -2.03
UBQLN3Q9H347 MORF4L1P6-201ENST00000418771 268 ntBASIC2.39□□□□□ -2.03
UBQLN3Q9H347 AC097463.2-201ENST00000421074 142 ntBASIC2.39□□□□□ -2.03
UBQLN3Q9H347 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms