Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC002044.1-201ENST00000606707 158 ntBASIC3.8□□□□□ -1.8
VPS11Q9H270 MIR6798-201ENST00000612887 67 ntBASIC3.8□□□□□ -1.8
VPS11Q9H270 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
VPS11Q9H270 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS11Q9H270 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS11Q9H270 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS11Q9H270 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS11Q9H270 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS11Q9H270 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.79□□□□□ -1.8
VPS11Q9H270 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS11Q9H270 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS11Q9H270 RLIMP1-201ENST00000339626 1680 ntBASIC3.79□□□□□ -1.8
VPS11Q9H270 RNU4-50P-201ENST00000364361 141 ntBASIC3.79□□□□□ -1.8
VPS11Q9H270 SNORA62-201ENST00000365493 153 ntBASIC3.79□□□□□ -1.8
VPS11Q9H270 RNU6-708P-201ENST00000384217 107 ntBASIC3.79□□□□□ -1.8
VPS11Q9H270 RNU6-611P-201ENST00000384276 104 ntBASIC3.79□□□□□ -1.8
VPS11Q9H270 AC092809.3-201ENST00000415453 231 ntBASIC3.79□□□□□ -1.8
VPS11Q9H270 UBE2V1P4-201ENST00000425374 344 ntBASIC3.79□□□□□ -1.8
VPS11Q9H270 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS11Q9H270 RPL23AP22-201ENST00000437556 453 ntBASIC3.79□□□□□ -1.8
VPS11Q9H270 TMSB4XP3-201ENST00000445144 114 ntBASIC3.79□□□□□ -1.8
VPS11Q9H270 RPL30P14-201ENST00000482744 348 ntBASIC3.79□□□□□ -1.8
VPS11Q9H270 RAC1P2-201ENST00000511164 579 ntBASIC3.79□□□□□ -1.8
VPS11Q9H270 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS11Q9H270 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.79□□□□□ -1.8
VPS11Q9H270 MRPL49P2-201ENST00000521066 465 ntBASIC3.79□□□□□ -1.8
VPS11Q9H270 CBX3P4-201ENST00000538909 354 ntBASIC3.79□□□□□ -1.8
VPS11Q9H270 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS11Q9H270 MIR4474-201ENST00000579189 78 ntBASIC3.79□□□□□ -1.8
VPS11Q9H270 MIR4425-201ENST00000580572 84 ntBASIC3.79□□□□□ -1.8
VPS11Q9H270 MIR3939-201ENST00000582614 106 ntBASIC3.79□□□□□ -1.8
VPS11Q9H270 AC006557.5-201ENST00000603126 811 ntBASIC3.79□□□□□ -1.8
VPS11Q9H270 AC098826.3-201ENST00000603823 466 ntBASIC3.79□□□□□ -1.8
VPS11Q9H270 MIR6810-201ENST00000622701 70 ntBASIC3.79□□□□□ -1.8
VPS11Q9H270 AL450472.1-202ENST00000637286 180 ntBASIC3.79□□□□□ -1.8
VPS11Q9H270 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
VPS11Q9H270 UBE2L2-201ENST00000254302 429 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 MIR335-201ENST00000362173 94 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 snoU2_19.2-201ENST00000363024 80 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 RNA5SP97-201ENST00000365006 84 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 RNU6-596P-201ENST00000365395 98 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 RNU6-1329P-201ENST00000365664 107 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 Y_RNA.471-201ENST00000384312 102 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 SNORA57.3-201ENST00000411095 141 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.78□□□□□ -1.8
VPS11Q9H270 HMGN2P20-201ENST00000437531 273 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 TPT1P12-201ENST00000448968 492 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 FABP5P13-201ENST00000452144 328 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 AL138752.1-201ENST00000452964 351 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS11Q9H270 AC006445.2-201ENST00000510061 472 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 APOOP4-201ENST00000513530 597 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 RNU4-71P-201ENST00000516258 113 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 RNA5SP290-201ENST00000517133 127 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 AC034114.1-201ENST00000520293 285 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 AC022695.1-201ENST00000522089 237 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 AC104576.1-201ENST00000524225 88 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS11Q9H270 KLKP1-201ENST00000595979 403 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS11Q9H270 AL390123.1-201ENST00000603216 237 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 AL161798.1-201ENST00000604630 131 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 AL158032.1-201ENST00000605401 106 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 MIR1244-1-201ENST00000612829 85 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 AL138880.2-201ENST00000616214 239 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 MIR1244-3-201ENST00000635744 85 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 MIR1244-2-201ENST00000636449 85 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 MIR1244-4-202ENST00000636813 85 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.78□□□□□ -1.8
VPS11Q9H270 AC007256.1-201ENST00000392253 2765 ntBASIC3.78□□□□□ -1.8
VPS11Q9H270 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
VPS11Q9H270 AC007656.2-201ENST00000624902 4547 ntBASIC3.77□□□□□ -1.81
VPS11Q9H270 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS11Q9H270 RNY1P16-201ENST00000363063 111 ntBASIC3.77□□□□□ -1.81
VPS11Q9H270 Y_RNA.183-201ENST00000363882 113 ntBASIC3.77□□□□□ -1.81
VPS11Q9H270 Y_RNA.200-201ENST00000364018 102 ntBASIC3.77□□□□□ -1.81
VPS11Q9H270 Y_RNA.245-201ENST00000364493 95 ntBASIC3.77□□□□□ -1.81
VPS11Q9H270 Y_RNA.277-201ENST00000364754 102 ntBASIC3.77□□□□□ -1.81
VPS11Q9H270 SNORD73A-201ENST00000386062 65 ntBASIC3.77□□□□□ -1.81
VPS11Q9H270 RPL21P65-201ENST00000406094 466 ntBASIC3.77□□□□□ -1.81
VPS11Q9H270 RNA5SP111-201ENST00000411386 101 ntBASIC3.77□□□□□ -1.81
VPS11Q9H270 AL451074.5-201ENST00000415894 435 ntBASIC3.77□□□□□ -1.81
VPS11Q9H270 EIF4EP2-201ENST00000422816 654 ntBASIC3.77□□□□□ -1.81
VPS11Q9H270 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS11Q9H270 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS11Q9H270 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS11Q9H270 RPS23P7-201ENST00000466210 444 ntBASIC3.77□□□□□ -1.81
VPS11Q9H270 AC107393.1-201ENST00000512403 346 ntBASIC3.77□□□□□ -1.81
VPS11Q9H270 RNA5SP471-201ENST00000516971 106 ntBASIC3.77□□□□□ -1.81
VPS11Q9H270 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.77□□□□□ -1.81
VPS11Q9H270 AMZ2P1-203ENST00000565833 850 ntBASIC3.77□□□□□ -1.81
VPS11Q9H270 MIR4643-201ENST00000577473 78 ntBASIC3.77□□□□□ -1.81
VPS11Q9H270 MIR548AI-201ENST00000579940 88 ntBASIC3.77□□□□□ -1.81
VPS11Q9H270 MIR3609-201ENST00000582661 80 ntBASIC3.77□□□□□ -1.81
VPS11Q9H270 RMST_8.1-201ENST00000610287 165 ntBASIC3.77□□□□□ -1.81
VPS11Q9H270 AC006111.3-201ENST00000622137 383 ntBASIC3.77□□□□□ -1.81
VPS11Q9H270 AC091953.5-201ENST00000622919 233 ntBASIC3.77□□□□□ -1.81
VPS11Q9H270 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
VPS11Q9H270 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS11Q9H270 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 264.4 ms