Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RNF38Q9H0F5 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF38Q9H0F5 AL356535.1-201ENST00000440335 398 ntBASIC3.98□□□□□ -1.77
RNF38Q9H0F5 PIGFP3-201ENST00000441918 722 ntBASIC3.98□□□□□ -1.77
RNF38Q9H0F5 RPL30P5-201ENST00000494923 336 ntBASIC3.98□□□□□ -1.77
RNF38Q9H0F5 UBE2CP3-201ENST00000502715 450 ntBASIC3.98□□□□□ -1.77
RNF38Q9H0F5 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF38Q9H0F5 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF38Q9H0F5 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF38Q9H0F5 AC103996.1-201ENST00000555468 102 ntBASIC3.98□□□□□ -1.77
RNF38Q9H0F5 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF38Q9H0F5 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.98□□□□□ -1.77
RNF38Q9H0F5 AL355877.2-201ENST00000603670 358 ntBASIC3.98□□□□□ -1.77
RNF38Q9H0F5 AC107294.1-201ENST00000609524 467 ntBASIC3.98□□□□□ -1.77
RNF38Q9H0F5 AP001282.2-201ENST00000616149 309 ntBASIC3.98□□□□□ -1.77
RNF38Q9H0F5 MIR6075-201ENST00000620782 95 ntBASIC3.98□□□□□ -1.77
RNF38Q9H0F5 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF38Q9H0F5 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RNF38Q9H0F5 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RNF38Q9H0F5 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF38Q9H0F5 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
RNF38Q9H0F5 AP001486.2-201ENST00000561652 5113 ntBASIC3.98□□□□□ -1.77
RNF38Q9H0F5 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF38Q9H0F5 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RNF38Q9H0F5 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNF38Q9H0F5 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNF38Q9H0F5 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF38Q9H0F5 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RNF38Q9H0F5 Y_RNA.54-201ENST00000362766 105 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 RNU1-76P-201ENST00000362903 159 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 Y_RNA.150-201ENST00000363562 102 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 Y_RNA.237-201ENST00000364439 102 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 RNU6-384P-201ENST00000364900 104 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 RNU6-395P-201ENST00000365662 106 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RNF38Q9H0F5 SNORA5A-201ENST00000384111 134 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 RNU6-611P-201ENST00000384276 104 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 Y_RNA.539-201ENST00000384635 107 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 RPL21P17-201ENST00000397467 475 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 Z98941.1-201ENST00000407764 100 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 MIR548H3-201ENST00000408771 118 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 RNU6-1203P-201ENST00000410703 110 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 AL592148.1-201ENST00000413568 445 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 AL158156.1-201ENST00000422509 473 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 EIF4EP2-201ENST00000422816 654 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 TMEM167AP1-201ENST00000423409 219 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 MTND3P9-201ENST00000429526 346 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 MYL8P-204ENST00000431574 518 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 MTCO3P29-201ENST00000432119 779 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 U8.21-201ENST00000459536 136 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 SNRPGP3-201ENST00000469405 227 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 KC877373.1-201ENST00000479066 408 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.97□□□□□ -1.77
RNF38Q9H0F5 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.97□□□□□ -1.77
RNF38Q9H0F5 AC022080.3-201ENST00000544433 482 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 TRAV28-201ENST00000557548 323 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 AL161798.1-201ENST00000604630 131 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 SNORA51-201ENST00000606420 132 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 RNU1-30P-201ENST00000606575 163 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF38Q9H0F5 AC004852.3-201ENST00000614131 326 ntBASIC3.97□□□□□ -1.77
RNF38Q9H0F5 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF38Q9H0F5 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RNF38Q9H0F5 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
RNF38Q9H0F5 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.97□□□□□ -1.77
RNF38Q9H0F5 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.77
RNF38Q9H0F5 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
RNF38Q9H0F5 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.77
RNF38Q9H0F5 Z75746.1-201ENST00000440243 2080 ntBASIC3.96□□□□□ -1.77
RNF38Q9H0F5 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.77
RNF38Q9H0F5 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.96□□□□□ -1.78
RNF38Q9H0F5 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF38Q9H0F5 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RNF38Q9H0F5 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RNF38Q9H0F5 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.96□□□□□ -1.78
RNF38Q9H0F5 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
RNF38Q9H0F5 Y_RNA.20-201ENST00000362479 113 ntBASIC3.96□□□□□ -1.78
RNF38Q9H0F5 Y_RNA.65-201ENST00000362846 100 ntBASIC3.96□□□□□ -1.78
RNF38Q9H0F5 Y_RNA.245-201ENST00000364493 95 ntBASIC3.96□□□□□ -1.78
RNF38Q9H0F5 RN7SKP53-201ENST00000411337 315 ntBASIC3.96□□□□□ -1.78
RNF38Q9H0F5 SNORD56-201ENST00000413522 71 ntBASIC3.96□□□□□ -1.78
RNF38Q9H0F5 AL096701.2-201ENST00000416920 238 ntBASIC3.96□□□□□ -1.78
RNF38Q9H0F5 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF38Q9H0F5 AC091286.1-201ENST00000431233 461 ntBASIC3.96□□□□□ -1.78
RNF38Q9H0F5 SNORA71B-202ENST00000439232 272 ntBASIC3.96□□□□□ -1.78
RNF38Q9H0F5 HMGN2P7-201ENST00000456186 273 ntBASIC3.96□□□□□ -1.78
RNF38Q9H0F5 RNA5SP290-201ENST00000517133 127 ntBASIC3.96□□□□□ -1.78
RNF38Q9H0F5 SNORA81.3-201ENST00000517283 198 ntBASIC3.96□□□□□ -1.78
RNF38Q9H0F5 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF38Q9H0F5 CASP1P1-201ENST00000526345 212 ntBASIC3.96□□□□□ -1.78
RNF38Q9H0F5 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF38Q9H0F5 AC130289.1-201ENST00000577321 73 ntBASIC3.96□□□□□ -1.78
RNF38Q9H0F5 MIR5696-201ENST00000578474 85 ntBASIC3.96□□□□□ -1.78
RNF38Q9H0F5 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF38Q9H0F5 MIR5187-201ENST00000583479 76 ntBASIC3.96□□□□□ -1.78
RNF38Q9H0F5 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.96□□□□□ -1.78
RNF38Q9H0F5 AF117829.1-206ENST00000621883 3802 ntBASIC3.96□□□□□ -1.78
RNF38Q9H0F5 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
RNF38Q9H0F5 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.96□□□□□ -1.78
RNF38Q9H0F5 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms