Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 RANP3-201ENST00000530970 276 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 RPL21P5-201ENST00000554662 472 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 AC026790.2-201ENST00000606282 430 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 FARSBP1-201ENST00000435808 1778 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 AP006437.1-201ENST00000641440 3685 ntBASIC1.56□□□□□ -2.16
SLIRPQ9GZT3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 RNA5SP276-201ENST00000362580 94 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 Y_RNA.40-201ENST00000362645 93 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 RNU6-655P-201ENST00000362858 107 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 RNU6-641P-201ENST00000384006 107 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 RNU6-1274P-201ENST00000384557 107 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 CBX3P9-201ENST00000402326 552 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 RNU2-8P-201ENST00000410727 190 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 POLHP1-201ENST00000411806 470 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 Z99497.1-201ENST00000421282 135 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 AC011233.1-201ENST00000422812 283 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 XKRYP1-201ENST00000423438 492 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 AL445646.1-201ENST00000431784 216 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 AL365400.1-201ENST00000431854 640 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 XKRYP2-201ENST00000432915 492 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 MTND6P13-201ENST00000443510 523 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 TAF9P1-201ENST00000445421 515 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 TAF9P2-201ENST00000454958 515 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 AC006026.2-201ENST00000457376 180 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 PMCHL2-203ENST00000457791 237 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 AC006512.1-201ENST00000468816 291 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 RBBP4P6-201ENST00000508098 202 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 AC005178.1-201ENST00000508392 440 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 MRPS17P9-201ENST00000511924 393 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 RNU6-1129P-201ENST00000515964 104 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 AP000763.2-201ENST00000540641 163 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 BNIP3P6-201ENST00000549284 499 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 AC007375.1-201ENST00000554513 578 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 AC104581.2-201ENST00000572227 430 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 CLIC4P2-201ENST00000601934 717 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 AL022161.1-201ENST00000604390 213 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 AL160281.1-201ENST00000605307 311 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 AC091304.9-201ENST00000612091 226 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 AL359314.1-201ENST00000616913 261 ntBASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
SLIRPQ9GZT3 RNU6-1210P-201ENST00000363775 107 ntBASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 U3.12-201ENST00000364498 214 ntBASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 SNORA72.3-201ENST00000365074 132 ntBASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 Y_RNA.333-201ENST00000365274 102 ntBASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 AL158823.1-201ENST00000418441 478 ntBASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 USP9YP18-201ENST00000425912 695 ntBASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 AC126389.1-201ENST00000477436 290 ntBASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 AC107393.1-201ENST00000512403 346 ntBASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 RNU1-86P-201ENST00000516108 154 ntBASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 RNU1-107P-201ENST00000516617 154 ntBASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 RNU6-685P-201ENST00000517088 95 ntBASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 RN7SKP256-201ENST00000517201 314 ntBASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 MIR4299-201ENST00000577899 72 ntBASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 AC022022.2-201ENST00000602989 360 ntBASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 AC005034.5-201ENST00000604219 466 ntBASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 AC012360.2-201ENST00000609349 391 ntBASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 AL132822.1-201ENST00000617063 513 ntBASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 RMST_7.1-201ENST00000621935 268 ntBASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 AC093648.1-201ENST00000623546 606 ntBASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.54□□□□□ -2.16
SLIRPQ9GZT3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SLIRPQ9GZT3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SLIRPQ9GZT3 RNU5F-7P-201ENST00000363696 115 ntBASIC1.53□□□□□ -2.16
SLIRPQ9GZT3 RNU6-611P-201ENST00000384276 104 ntBASIC1.53□□□□□ -2.16
SLIRPQ9GZT3 RAP1BP3-201ENST00000407180 549 ntBASIC1.53□□□□□ -2.16
SLIRPQ9GZT3 Y_RNA.598-201ENST00000410480 95 ntBASIC1.53□□□□□ -2.16
SLIRPQ9GZT3 RNU2-32P-201ENST00000411193 191 ntBASIC1.53□□□□□ -2.16
SLIRPQ9GZT3 RNU6-387P-201ENST00000411331 105 ntBASIC1.53□□□□□ -2.16
SLIRPQ9GZT3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SLIRPQ9GZT3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.53□□□□□ -2.16
SLIRPQ9GZT3 UBE2D3P4-201ENST00000441973 436 ntBASIC1.53□□□□□ -2.16
SLIRPQ9GZT3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms