Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 RANP3-201ENST00000530970 276 ntBASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 AC135279.1-201ENST00000543493 504 ntBASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 BNIP3P8-201ENST00000597863 560 ntBASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 AL022154.1-201ENST00000604698 785 ntBASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 AL603755.1-201ENST00000619504 163 ntBASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 AL162373.1-201ENST00000620433 407 ntBASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 AC120349.3-201ENST00000624377 529 ntBASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.06□□□□□ -2.08
POLR1EQ9GZS1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 RNU6-1010P-201ENST00000362757 107 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 RNU1-23P-201ENST00000363361 144 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 U3.13-201ENST00000364804 214 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 RNU6-169P-201ENST00000365336 107 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 MT-TH-201ENST00000387441 69 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 RNU2-39P-201ENST00000410604 198 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 RNU6-195P-201ENST00000411352 109 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 SRIP2-201ENST00000428470 166 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 RPS24P1-201ENST00000438550 371 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 AL022238.1-201ENST00000442557 355 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 HMGB1P35-201ENST00000503360 598 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 RBBP4P6-201ENST00000508098 202 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 RNU6-123P-201ENST00000516163 102 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 SCARNA24.1-201ENST00000516465 137 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 AC145350.1-201ENST00000567426 208 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 DEFB131E-202ENST00000602581 683 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 AL121992.2-201ENST00000606262 256 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 AC013412.1-201ENST00000610687 192 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 AC012409.4-201ENST00000612923 249 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 Y_RNA.783-201ENST00000613546 102 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 uc_338.15-201ENST00000615470 191 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 AC090517.3-201ENST00000625170 141 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 CENPCP1-201ENST00000533085 2578 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 AC092881.1-201ENST00000638218 2733 ntBASIC2.05□□□□□ -2.08
POLR1EQ9GZS1 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 RNY4P34-201ENST00000364779 95 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 RNA5SP160-201ENST00000364866 120 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 SNORA20.2-201ENST00000383922 131 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 RNU6-843P-201ENST00000384454 104 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 MIR186-201ENST00000384988 86 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 MIR10A-201ENST00000385043 110 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 SNORA40.19-201ENST00000390846 128 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 SNORA26.8-201ENST00000391306 124 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 CISD1P1-201ENST00000393907 327 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 AL512604.1-201ENST00000404812 257 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 AC008267.5-201ENST00000424928 265 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 AC027124.2-201ENST00000428249 105 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 MED13P1-201ENST00000428342 171 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 ZNF702P-202ENST00000434269 1966 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 USP9YP8-201ENST00000441913 500 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 RPL23AP7-203ENST00000449021 469 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 RNA5SP233-201ENST00000459153 113 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 DUXAP5-201ENST00000529668 529 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 AC233702.2-202ENST00000562547 291 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 AC093249.1-201ENST00000567049 203 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 AC012414.6-201ENST00000568241 401 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 MTCYBP33-201ENST00000575007 1130 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 MIR4448-201ENST00000584360 86 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 MIR548AC-201ENST00000585049 88 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 ELOCP5-201ENST00000604924 333 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 AL670379.2-201ENST00000604983 252 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 AL670379.4-201ENST00000605279 254 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 AL133173.2-201ENST00000614270 90 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 AP000770.2-201ENST00000623694 100 ntBASIC2.04□□□□□ -2.08
POLR1EQ9GZS1 HAUS6P2-201ENST00000433254 2404 ntBASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 AP000568.1-201ENST00000282964 442 ntBASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 RNA5SP276-201ENST00000362580 94 ntBASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 RNU6-641P-201ENST00000384006 107 ntBASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 RNU6-72P-201ENST00000384285 79 ntBASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 RNU6-297P-201ENST00000384636 107 ntBASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 RNU6-1140P-201ENST00000410517 106 ntBASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 HMGN1P14-201ENST00000412459 517 ntBASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 MTND2P18-201ENST00000419962 1030 ntBASIC2.03□□□□□ -2.08
POLR1EQ9GZS1 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms