Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 ATP1B3P1-201ENST00000605365 821 ntBASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 AC018692.3-201ENST00000623929 123 ntBASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.65□□□□□ -1.83
LRFN3Q9BTN0 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 RNU6-562P-201ENST00000362731 107 ntBASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 SNORD3E-201ENST00000362899 217 ntBASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 SET-203ENST00000372688 801 ntTSL 2 BASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 RNU1-73P-201ENST00000383971 164 ntBASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 RNU6-328P-201ENST00000390887 106 ntBASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 DBIP2-201ENST00000419076 262 ntBASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 U8.20-201ENST00000459445 131 ntBASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 AP002884.2-201ENST00000471647 395 ntBASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 AC006445.1-201ENST00000491925 405 ntBASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 AC139453.3-201ENST00000493276 369 ntBASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 AC015911.1-201ENST00000495111 156 ntBASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 PPBPP1-201ENST00000510807 373 ntBASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 RNA5SP356-201ENST00000515972 94 ntBASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 AP002404.1-201ENST00000532005 451 ntBASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 AC091544.4-201ENST00000555268 342 ntBASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 AC006157.1-201ENST00000611750 366 ntBASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 AC011890.2-201ENST00000613393 294 ntBASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 MIR6128-201ENST00000615528 109 ntBASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 ATP5A1P2-202ENST00000616464 443 ntBASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 AL732372.2-225ENST00000642124 456 ntBASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LRFN3Q9BTN0 AC007256.1-201ENST00000392253 2765 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 RNU6-884P-201ENST00000363889 107 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 RNU6-266P-201ENST00000364225 107 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 SNORA63.7-201ENST00000365579 123 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 RNU6-128P-201ENST00000383976 107 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 Y_RNA.404-201ENST00000383978 102 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 Y_RNA.476-201ENST00000384347 108 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 Y_RNA.574-201ENST00000384766 95 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 MIR887-201ENST00000401258 79 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 RNU6-1077P-201ENST00000410506 102 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 AC099548.1-201ENST00000421443 426 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 HMGB1P37-201ENST00000439613 609 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 RPL26P9-201ENST00000457466 433 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 RPL23AP62-201ENST00000463396 453 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 AC011005.2-201ENST00000487324 359 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 AC116337.1-201ENST00000509680 687 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 TBCAP3-201ENST00000512475 312 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 SNORA31.1-201ENST00000515993 133 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 SNORA31.5-201ENST00000516190 133 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 SNORA70.14-201ENST00000516205 110 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 RNU6-1069P-201ENST00000516612 133 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 IGLV3-26-201ENST00000520756 302 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 MYL12BP1-201ENST00000569826 507 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 U2.21-201ENST00000637295 81 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 AC093908.1-201ENST00000623125 8092 ntBASIC3.63□□□□□ -1.83
LRFN3Q9BTN0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 CDC27P3-201ENST00000635418 1910 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 AL353746.1-201ENST00000566293 6881 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 RNU6-778P-201ENST00000363269 103 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 Y_RNA.153-201ENST00000363615 91 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 Y_RNA.324-201ENST00000365165 102 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 Y_RNA.473-201ENST00000384333 102 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 Y_RNA.496-201ENST00000384444 101 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 MIR504-201ENST00000385065 83 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 SNORA75.6-201ENST00000391318 127 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 RNA5SP38-201ENST00000410750 119 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 RNU6-847P-201ENST00000411115 108 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 RPL21P109-201ENST00000422213 475 ntBASIC3.62□□□□□ -1.83
LRFN3Q9BTN0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms